Detailed information on CNT30101904


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553804Oryza rufipogonOryza glaberrima37.0816.4210099forward

Expression of CNT30101904

Peptides detected in this lncRNA

>peptide 1 (87 aa)
LLVLVLDLLGLGVRLLLALLGAAAEAEHEVEGGLLLDVVVGEGAAILELLAGEDEDSTSSVMVFPVRVFTKICILAAAGEGSPPRLRR

>peptide 2 (38 aa)
FLCLCLIFLGLVYVFFLRFLAPPRRRSTRWRVDSFWML*

Sequence

>CNT30101904
CCTTCTTGTGCTTGTGCTTGATCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTTCTTGGCGCCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGA
CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCA
GGGTCTTCACGAAGATCTGCATCTTGGCGGCGGCGGGGGAGGGGTCGCCTCCGCGGCTGCGGCGGCG