Detailed information on CNT30101819


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673503Oryza rufipogonSetaria viridis29.8445.7890.35114forward
CNT30220389Oryza rufipogonHordeum vulgare30.892785.59118forward
CNT30656408Oryza rufipogonTriticum dicoccoides30.3729.8286.21116forward

Expression of CNT30101819

Peptides detected in this lncRNA

>peptide 1 (32 aa)
GSFTTYIAIGIVQLYQHHKQGELIHGDPAMGD*

>peptide 2 (33 aa)
MAIRPWGTSSTVQRICMDGSDQEEGEAETRNLI*

Sequence

>CNT30101819
GGATCCTTTACAACTTATATAGCCATAGGAATAGTACAATTATATCAACATCATAAACAGGGGGAATTAATCCATGGCGATCCGGCCATGGGGGACTAGC
AGTACGGTACAGAGGATTTGCATGGATGGATCGGATCAAGAAGAAGGTGAGGCAGAGACGAGGAATTTAATTTAGATCTTGCCGCGTGGGCCGGGCGTCG
GCGGCAGCTGCGGGCCCTTCTTGATCGGAAGCAGGAGCCCCCTCTTGGTGAAGGGCCCCGCGAACGTCTCGAAGAACTTGCTCTGCATCGATCACCCACA
CGAATTATTCAGTAAATTAATCATCGAGCTAAGTATATATTTTAGTCAGGTAATACTAACCTGGAGAGGGTTGTACGGCGAC