Detailed information on CNT30101780


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692496Oryza rufipogonOryza sativa67.977.3896.15208forward
CNT30577513Oryza rufipogonOryza barthii47.0635.1297.92144reverse complement

Expression of CNT30101780

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MIVRVQVVLFLILLRCSVREFRCEFGVCLPVRLLY*

Sequence

>CNT30101780
GTTAGGGTTTCGTCTTAGGGGTATTTGAGACAATGTCTTAGGAGTTTTAGGCTATAAATAGAGAGATGATTGTAAGGGTGCAGGTTGTTCTTTTTTTAAT
CCTTTTGAGATGCTCGGTGAGAGAGTTTCGGTGTGAGTTTGGAGTGTGTTTGCCCGTGAGGCTTTTGTATTAGGATTAGTGTGGAGTGTGTTTGTCCGAG
AGATTTTAAGTTTGTGTTAATGTTCCTCTGAAGGTGTATGTTTGCTCCTAGTTGAGTGGTTATTTTGCATCACCTATGAATGAAATGATTTGAAGGGTTT
CGTTTT