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Detailed information on CNT30101770


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40477|ERF4_TOBAC, E-value = 1e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693427Oryza rufipogonOryza sativa31.4553.5899.62262forward
CNT30153825Oryza rufipogonPrunus persica13.3320.2984.68111forward

Expression of CNT30101770

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MAFFANAAGGDGARSTIDEESESLCAKAATVTGAGAILSMRQPEK*

>peptide 2 (58 aa)
MPPAPAAAAAAARWNRSSSSDGGIGMAFMGACTSLPNDSTVLLLLLPLFTPAAGAPLG*

Sequence

>CNT30101770
GCAAAACAGAGTGAAAAGATGATTTCTTAGAAGGGTTTCTACATAGTTTCTCATGACTATCAAAATAATAATAATACATATATAATCCCGCTCCATAACA
ACGCCGGCAGGATATGTCTTAGGTGACACACATGGTGTGATCTTCTCTTAAACTACATCGCCGGCGAAAAAAACTATTTACAAAAATGTCTTCCCTCAGT
TAAGCAAGAGGGTCTAGGCATAAGAGGTACACGGAATTTTTCTACTACTAAAAATTAAAAAGAAATAAATGAACTAGCGGTCATCATGTAAAAACTCCGG
CTGCTAGACCTCCATCGGCGGCGGACAGTTCAGATCAAGATCAAAAGCGATGGCCTTCTTCGCCAACGCGGCGGGCGGTGATGGTGCCAGATCCACGATC
GACGAGGAGTCGGAGTCGCTCTGTGCCAAGGCGGCCACGGTGACCGGCGCCGGCGCAATCTTGAGCATGCGGCAACCAGAGAAGTAGTAAGGGTGCGATA
CGGGGTAGCCCTCGAAAGGGAAACGCATGCCGCCTGCGCCGGCGGCCGCGGCCGCTGCGGCGCGGTGGAACAGGTCGAGCTCGAGCGACGGCGGGATCGG
CATGGCCTTCATGGGCGCCTGCACGTCGCTGCCGAACGACTCGACGGTGCTGCTGTTGCTGCTGCCGCTGTTCACACCGGCGGCGGGCGCGCCGTTAGGG
TAGGGGAAGTTGGTCTTGGCCTTGGCACCGCGGTACTCGCGCGCCGCGGCGTCGTAGGCGCGCGCGGCCTCCTCGGCCGTGTCGAACGTGCCGAGCCACA
CGCGGCTCTTCTTGGCCGGGTCGCGGATCTCCG