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Detailed information on CNT30101766


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT001124, E-value = 1e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693761Oryza rufipogonOryza sativa60.1149.5799.87755forward
CNT30555550Oryza rufipogonOryza glaberrima24.1213.2690.76303reverse complement
CNT30371170Oryza rufipogonOryza glumipatula42.642.9486.73535forward

Expression of CNT30101766

Peptides detected in this lncRNA

>peptide 1 (46 aa)
QPAAPFLSFLFFSFSFFSESLQCIPRHCSSSTSGQPTEPELLPPPL*

>peptide 2 (30 aa)
MRGIYLLVVLYLFPQKPEFNSLYFTKIKLV*

>peptide 3 (50 aa)
MKVKRHLTPPPIVRAAGQYQDDEVKSSEPSVHKLAVQVKKLRKENIELRDR

>peptide 4 (54 aa)
SLLLHSFLFFSFPFPFSLKVYNASLGIVHLQPQASRLSPSCCRLPFESAFIGCS*

Sequence

>CNT30101766
CAGCCTGCTGCTCCATTCCTTTCTTTTCTTTTCTTTTCCTTTTCCTTTTTCTCTGAAAGTCTACAATGCATCCCTCGGCATTGTTCATCTTCAACCTCAG
GCCAGCCGACTGAGCCCGAGCTGCTGCCGCCTCCCCTTTGAATCCGCCTTCATCGGTTGCTCCTAAATTCGATTGGATGAGGGGAATTTATCTACTCGTT
GTCCTCTATCTTTTCCCTCAAAAACCGGAGTTTAATTCCTTGTATTTTACCAAAATCAAACTCGTTTAGAGTTTATCTCTCCAACCAAACCATCAGATTT
TCCGGCTCAAATCCTCTCGTTTGGAGTCCGATCCCCCTCACCCATGCCTATATAAAGCATCCCCTAGTCGTCTTCTTCTGTTTGCCTCAAGTCTTAGCCG
CAGCCGTCGCTTGTAGCGCCGTCGCCGCGTAAACCCTAGCGCCGTCGCCGCCGTAGCCGCTTCAGCCGCTTTGCGTCGCCGCTGTGGTCGTCGCCGCCGC
CTTCCGTCGCCACCGCCGGCTTTGCCAGGTGGAGGAGCATCCCGTCCGCCCCTTCGCCGCTGCTGCATCTCGCCGGAGCGCCGCCGCTGACGTCAAGCCG
AGCCGTGCCGCCGCTGGAGCTCGTCGTCGATCGTCGTTCGTCGTAGTTCTTTGCACTGTTTCCGACGTTCCGGAGGAGAGGGTTTACGTCGAGGAAGGTT
CAGAAGCGATTGAGGAAGGTCAAGAGGAGTACTTCAGTGAAGGTGATGATCAGGAGGATTAGGCTTTGTTTGGGTCAAGTTGCTTGTGGAGTGGAGTCGC
CATAGCTGTTTAGTCTTTTGTTTATTTTTCCGCTGCGTAGAAAGTTATTCTTTTGAGAGGAACTATCCACCTCTGTAATAATTTATCCTTTTGCGAATAA
CAATTAGCTGTTTGATAGTGTTCTATTATCAATTCGTTATTGTGTGCCTCGGCTGATTCTTGGATGAGGATTTAACACACATGTAAGCGTTTGGAATTTT
GGATAGAAATTCCGGGCGTGACAGTGGGTATGGCAAGGGTTTGCTCCGACCTTTGACGGCATCGGAGAAGGAGGGGGCAGCGGAATCCCGTAACCCTCCA
CCTATGAAGGTGAAGCGTCACTTGACGCCCCCTCCAATTGTAAGGGCGGCCGGCCAATACCAAGATGATGAAGTAAAGTCGTCGGAGCCCTCGGTCCATA
AGCTCGCCGTTCAAGTAAAGAAACTCCGCAAGGAGAACATAGAGCTTAGGGATCGC