Detailed information on CNT30101748


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696692Oryza rufipogonOryza sativa35.9834.583.9118forward
CNT3068378Oryza rufipogonLeersia perrieri29.275.9684.3896forward
CNT30110790Oryza rufipogonOryza longistaminata59.4518.0298.97195reverse complement

Expression of CNT30101748

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MCVQVIGVDLGQRRIGTRLREKLRSRAIKDAG*

>peptide 2 (35 aa)
MLGDKIGHKVAHGGRTPCEEVFATEFARSSASAGFA

Sequence

>CNT30101748
ATGTGAAACCATGTGTGGTTATAGTTCTTTTGTGATGGGAAATTGACAAGTACCGGAAGTGCAAGAAGTGTGTGCGTAGACTAACATTGGTCAGGTTGCG
ACATCTGTGCCAAGACAACGGTTGTTTGGTTCATGTGTGTGCAGGTGATCGGGGTCGATCTTGGTCAACGGCGGATCGGGACTAGACTCAGGGAGAAGTT
GAGGTCCAGAGCGATCAAGGATGCTGGGTGACAAGATTGGACACAAGGTTGCACACGGTGGACGGACACCGTGTGAGGAGGTCTTCGCAACGGAGTTCGC
AAGGTCAAGTGCAAGTGCCGGGTTCGCG