Detailed information on CNT30101747


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693518Oryza rufipogonOryza sativa92.278.0699.25402forward
CNT30116762Oryza rufipogonOryza nivara43.8114.8696.86191reverse complement

Expression of CNT30101747

Peptides detected in this lncRNA

>peptide 1 (77 aa)
ICFAEPDRQTRLFSPHKHKLLYLLLLGGKRKSQQIDLHRMTQKAAKKIENFHPESLENASKVGLFKQESNQMTTKSP*

Sequence

>CNT30101747
TATTTGCTTTGCAGAACCTGACAGGCAGACAAGATTATTCTCCCCCCACAAACATAAGCTTCTCTATCTATTATTACTAGGTGGAAAAAGAAAATCTCAA
CAAATCGATTTGCACAGAATGACACAAAAGGCAGCCAAGAAAATTGAAAATTTCCACCCGGAATCGCTGGAAAACGCAAGTAAGGTAGGACTATTTAAGC
AGGAGTCCAACCAAATGACCACCAAGAGCCCATAATCCAACTCCGGCCGAGCAAAGAACCTGCTTTATTCATACGAGGTATCTTTGGGAGGGACGGAGGC
AGACGGCAGCGGGAGGTCAAGGGCGGCAGTTAGGGCACCGCCGGCGGCGGTGGAAGGAGGCAAAGAAGAGCAGAGCAAAGGGACCCTGGCTCAGCCGCTC
ATGGAGAGGAGGAGAGGAGAGGAGGTGGATTTGCGG