CANTATAdb - search

Detailed information on CNT30101718

BLAST search results

BLAST vs Swiss-Prot:
sp|Q6L4S3|HIRL1_ORYSJ, E-value = 5e-61

BLAST vs NONCODE: nothing found

Expression of CNT30101718

Peptides detected in this lncRNA

>peptide 1 (40 aa)
YNTENRITCTFTCLTLKFHKVFTRHSSTHTYTIGYHSQLK*

>peptide 2 (36 aa)
MKKLQDISNHTGQIKRNSSLAIPQLVSHMDANGRWW*

>peptide 3 (47 aa)
MSRTAPISFMVSKYWVMSTMSITSLAVVPGTFTENPSTLSLNPSTIA*

>peptide 4 (53 aa)
MLMGGGGSLALKKAVADLRGDVADGADLLHGVEVLGDEHHVHHVLGRGARHVH*

Sequence

>CNT30101718
ATACAATACAGAGAACCGGATTACATGCACATTTACATGTTTGACGCTGAAATTTCACAAAGTTTTCACAAGGCATAGTTCCACACATACATACACGATA
GGATATCATTCACAACTAAAATGAAAATGTTGCCCGCGCGCGCACACACGTCGGTCGGACAGCTAGCATGAAGAAATTACAAGACATATCTAATCACACA
GGACAAATCAAGAGAAACAGCAGCTTAGCAATCCCACAGCTGGTGTCCCACATGGATGCTAATGGGAGGTGGTGGTAGCCTGGCCCTGAAGAAGGCCGTC
GCGGATCTGCGTGGCGATGTCGCGGACGGCGCCGATCTCCTTCATGGTGTCGAAGTACTGGGTGATGAGCACCATGTCCATCACGTCCTTGGCCGTGGTG
CCCGGCACGTTCACTGAGAACCCCAGCACGCTGTCCCTCAACCCATCCACGATCGCCTGACGCTGCCTCGCGATACCCAGCCCCGACAGGTACTTTGCTT
CCGCTTCTCCCTCCGCCCTCTTTATCTGCACGATCTTCTCTGCCTCTGCCTTCTCGTTTGCAGCCACCCTCAGCCT