Detailed information on CNT30101691


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004305, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693450Oryza rufipogonOryza sativa95.4688.9699.822248forward

Expression of CNT30101691

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MHFPSSFRTSAACMLAYFLFFIMNESLQYCTYLVKVDSCIHYLPEACHFASPTPIYFLLEN*

>peptide 2 (53 aa)
AFLSVAILFSALFSLSFFHSFFSFLFIVFSGERESWLAGVCEREGLPMRAREK*

>peptide 3 (65 aa)
MAEMKSNDFFWLHLTVHCLLVLHFFTSPLYICFCYNSNKKLICAFLSYSEQQQPAWLHFFLLYSE*

>peptide 4 (67 aa)
RFSVRSHFVLSSLLALFLSLFFFFSLHCFLRRERELACRRVRKRGLADARAREVGRHGDLARRRVFC*

>peptide 5 (43 aa)
MAGFFFFVLSLSSDLWLVDGDFFCVICIFRNKLDMLLADLQVC*

>peptide 6 (44 aa)
MTHPNIVAMLIICGACQSVNSFAVKFDQEAQLQHPVWSIPFCIG*

>peptide 7 (31 aa)
MKFSTKILVKKKKILRRSHMMHNNRCCLGRS*

Sequence

>CNT30101691
GCGCTTTTCTGTCCGTAGCCATTTTGTTCTCAGCTCTCTTCTCGCTCTCTTTCTTTCACTCTTTTTTTTCTTTTCTCTTCATTGTTTTCTCCGGAGAGAG
AGAGAGCTGGCTTGCCGGCGTGTGCGAAAGAGAGGGCTTGCCGATGCGCGCGCGAGAGAAGTAGGTCGCCATGGTGATTTAGCTCGCCGGAGAGTTTTCT
GCTGATTTCTCTCTCCTTGTCTCCTATTCGTTTGCATCATTAGTTGATTTTTTTTTTCAATCTTATTCCAGCTAGGTTTTGATGCTTCAGGTAGCTCTTA
ATGTTCGGATCTGATGTTTGTTTAACTGTTTTAGATTTTGGAATCGGTATAGGTCTTGGTTTAGTCCCCTGATCTGTTGATTTCTATGTCATGGAACCTA
AACACGCGGAGCACCTCCGTCCTGCCCTTGTTTTGATTAGTCCCCTGATCTATTGAATTCTATGTCATGCCGATGAGATTGCCTAGCTGTTGATTTTTTA
TTTTGTTAAGTTCCAGGTGAGTAGTGCTCTGATCTGTTTATTTATAGGTAAAGCTACACACTATTTGAAATTTTCTAGGTCTGATCTGTTTTTTTGAAGT
ATATCTGCTTTGTGTGATTTGAGATTAGACTAAATCGTAACCACCGAACTAGCCATCGGTGGAAACGATGGCTGGATTTTTTTTTTTTGTCTTGTCACTG
AGCTCGGATTTGTGGCTGGTAGATGGGGATTTTTTTTGTGTGATTTGCATTTTTCGGAATAAATTGGACATGCTTTTGGCAGATTTACAGGTTTGCTAGC
ATCTTTTTCCCCCTCTGTTTTGTTCTGTCCTGTAGAGGGGATTTTGTTTTTTTTCCTCTGTTCTTAACATGCACGTCTCCTTCTGTGTTTGTTAACAATA
AATTGTAAATGTGTCCACCTTAGAATATCAAAAGCTTTTACCATGTTCTTTGTTTTATGAAGCAAAGCAGTGTCAGTTATACACCTAAATCTTTCAGCTG
GTTAAGTTGCAAGCACCTTTAAAGCTCCATTCATTGTGTCTTATACGATAGAACCAATGAAGATCCCTTCTACAGTACAAACTTGATTGAGCAACCCTGT
GCAGGCTGCAGCAAGCTCACATCTAAACTGTGCGTTGATTAAAGATATAGGTTGTGTTCAATTTGCAAAACAAGATGATGTATGATTTCCATGTGCTTCT
GTTACGATTCCCTTCTGTTATTGTTCTAATATAAAGTTCAGATGCACTTTCCTTCATCATTTAGAACATCAGCAGCATGCATGCTTGCATATTTTTTATT
CTTTATTATGAATGAATCATTGCAATATTGTACTTACTTGGTAAAGGTTGATAGTTGTATACACTATTTACCTGAAGCTTGCCATTTTGCTAGCCCCACA
CCCATATACTTTCTCTTGGAAAATTAATACAGCAAAAGTGATTAAGTTTTTTTAGCAATTAGAAGTTATTTATGTCTTTTGACTAAGTCCTTGAACATCC
ATTGGTCTACACTAGTTTGTTGTAATCAAGTTTTGTGAGCAATGGCAGAAATGAAGAGTAATGATTTTTTTTGGTTGCATCTAACTGTGCATTGTCTACT
AGTGTTGCATTTTTTTACTAGCCCTCTTTACATCTGTTTTTGTTATAATTCTAATAAAAAGTTAATATGTGCTTTCCTGAGTTATTCAGAACAACAACAG
CCTGCATGGCTGCATTTTTTTCTTCTTTATTCTGAATGACCCATCCCAATATTGTTGCCATGTTAATTATTTGTGGAGCCTGTCAGTCAGTTAACTCTTT
TGCTGTGAAATTTGATCAAGAGGCTCAACTACAACACCCTGTTTGGTCCATTCCCTTCTGCATCGGCTGACTTGTCATATGAAATTTTCTACGAAGATCC
TGGTCAAAAAAAAAAAAATTCTACGAAGATCACATATGATGCATAATAATAGGTGCTGTTTAGGCAGAAGCTGAGTTTCATGGTGGCATTTCAAGCTCAA
CATATGAGATGTGCTCGTTTGATCAAATCGGTTGTTAAAGGTATTAGAGCAAATATCACTGATTGATACATGTCTTCTCTGCAGTGATTTCTGACAGATG
TTTTCTCCTTGAATGAGCTTGTAAAATTCTTTACCAATTTTTGTGAGATTCCATTTTGTTCTCTCTATGCACACATGCCACAATGAAAAATGTTAATGAA
GTTCTGAGTTAGTAATGGCCTAGTTTTGTACTGTGGAATCTGTTTTCTACACTAGTATGAGTATTTTTTTTTCTTTTTCTTTTGTATGGTTCCGACCATT
TGTATTGTGTCAAAAGTTTTGAATGATAATTTCGTGTCTAATTTCTATTGGGCTC