Detailed information on CNT30101665


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39203|SD22_ARATH, E-value = 4e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522099Oryza rufipogonSetaria italica21.014.69450forward
CNT30292814Oryza rufipogonTriticum aestivum57.5638.3881.75137forward
CNT30587624Oryza rufipogonMusa acuminata24.3714.3991.3858forward
CNT30465446Oryza rufipogonSaccharum spontaneum47.95.3884.21114forward
CNT30350229Oryza rufipogonEragrostis tef49.167.584.62117forward

Expression of CNT30101665

Peptides detected in this lncRNA

>peptide 1 (33 aa)
GSLAPSEVMGSGRCGRTGPRTAQLRRSRHQISR*

Sequence

>CNT30101665
AGGCTCACTTGCTCCTTCGGAAGTGATGGGCTCAGGGCGTTGCGGGCGCACAGGACCTCGAACAGCACAACTCCGAAGGAGTAGACATCAGATTTCTCGG
TAATACAGCCCACGGGCGGCGCCGATGCAGATCTCCAGCCTCTGCTTCCACGACAATGGTGGGTTCTTGGTGTTGTACAAGTGTTCTCGAAGTGTCCCAT
GAGCCATGTAGTCATATACCAAAATCATCTCATTCCTA