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Detailed information on CNT30101598


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005543, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553134Oryza rufipogonOryza glaberrima88.1545.7685.51766reverse complement

Expression of CNT30101598

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MRSERNVISSERSSCVPEVFRENWMRDPTSSQPGFYNIHTQRSQYNQDIYLRLGKYHICPSRHKFASFART*

Sequence

>CNT30101598
GCTATTATATCAAATAATGAATGCATGAAATAGTATTTAAGTAGATCTAGGTTTACTGGCAGAAAGCTGAGAATAAAGAGGAAGAAAGCCTGGTATGTCT
TTATGCAACAGTATTTAGTAAAATCTTGAGTTAAGTTTCTAACCAAATATCATATGAGTCCCGATACTCAATTCCGTGAGCACGGCTATTCGAATAGTTT
CATGAATACTCTACTGCAGTAGATGTACGCTTTACTCGTAGTCCACGACTTGCCAATTTTCATTAGCTTAGTCGTAGCCCAGCCTTAGGTTATTAACAAT
AGTGGCACCTGTTCCATGAACTCTAGTCCCCATGCGCTCTGAACGTAACGTTATCAGCAGCGAGAGGAGTTCTTGCGTTCCCGAGGTTTTTAGAGAGAAC
TGGATGAGAGACCCCACGTCATCTCAACCAGGTTTTTACAATATACACACACAGCGATCGCAATATAATCAAGATATTTACCTGCGCCTCGGTAAATATC
ACATTTGCCCTTCGCGGCATAAGTTTGCCTCCTTCGCGAGGACTTAGATAAGAACCACTGTACAGAGGTACCACATTGTTAATTAACCTAATAACTAGGT
CTGTCCCTATTCTAGAAGCTGCGGTCATACTCGTTCGTTTGACATAAGTATTTGGTGGCAATTATATCGATAGAGACAGTACTAGCCACCCGGAAATCAA
CTAATTCATGCGTACTGTCCCAATCTAAGTTCATTATATTTTTATGCAGTCTAACTAGGCAGGGCTAAGCAAAATCTAGCATATATCTAGTTTGCTATAT
GTTCAAGTTATGAATTCAAAATCATGAATGGCTAATGCTTAGAATAAAGCTATAGAGTATAGGATAATT