Detailed information on CNT30101554


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692830Oryza rufipogonOryza sativa85.7871.68100362forward

Expression of CNT30101554

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVLMKLEEEESSSRSSGRMWGRQLVREEM*

Sequence

>CNT30101554
CAAAGCTGAAGAAACAAGAAGCAGAGGCATCACACAAGGATGATTAAAACTGATTCTGGTGAGGAACAAATTAACATACAAGCAAAGTGGACTTCTGTTT
GATTTGGCTATAGAGGTGGAAAGAATTGGGGTTGGATGAGATTCAGTATATGGTAGAGGATCCGATATGGTGTTAATGAAGCTAGAAGAAGAAGAAAGCA
GTAGTCGATCGAGCGGTCGAATGTGGGGACGACAATTGGTCAGGGAAGAGATGTAAGGCGATGAGCTAGCTGATGATCGTGAGAGAGAGTGGTGAACCGG
AAATTATAAGTCTAAATTTTTAAAGCCAAGCCGAATTATAGTCCAAATTTTATTTAGTTCCCACCTGTCATATTCGAGTTGCAGATTGTTTATCACACCT
TTGGTGTAACCGTGAAGTTTTG