Detailed information on CNT30101533


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006667, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553169Oryza rufipogonOryza glaberrima14.273.9297.57411forward
CNT3067861Oryza rufipogonLeersia perrieri5.827.1888.69168reverse complement
CNT30596020Oryza rufipogonOryza meridionalis22.35100.7892.27647reverse complement
CNT30110851Oryza rufipogonOryza longistaminata5.745.45100165forward
CNT30575554Oryza rufipogonOryza barthii10.2210096.96296forward
CNT30116327Oryza rufipogonOryza nivara13.8289.0997.5400forward
CNT30604299Oryza rufipogonOryza punctata32.1631.1380.77931forward

Expression of CNT30101533

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MASRALPIAAATCVGPVTIGWGKVEEWNRNVLLYILSFDLAPIRAAVCRQRA*

>peptide 2 (51 aa)
MHLVSCPNSSRVNGDRQNKTVLLLKPKLGLGSCNRVGLSQKCLPRPPRIST*

>peptide 3 (47 aa)
MFCSIFYLLTSPPLEPPFAASELEIELSHGCRCFLLLWRKAGPGCKF*

>peptide 4 (43 aa)
MFLTCMQEIEPSTMTHRCMHGVPSASNCSRYLRRSSNHWLGKS*

>peptide 5 (41 aa)
MAVAASCSCGEKLDLVASFRNPRVRHAKVQSKRIIENIYEN*

>peptide 6 (40 aa)
CSLASPPIPPHSVVHPKSKKPEWESSFSLSSPSSSCRPPG*

>peptide 7 (40 aa)
MPFSVYMACYFYISETTNVNEMILVSKTSLSYSLPTVIMP*

>peptide 8 (32 aa)
MHARDRAVHHDASMHAWRPERFQLQPLPASVQ*

>peptide 9 (32 aa)
MHKLNCLKMSVTGRVVYIQLGDTLCFAAGITK*

>peptide 10 (79 aa)
MIISSLSSVRPPETALISNGPSAFMPTPIWVILDFVESLSRYLSNANASGLMSKFISSQRGSPKQDSAVAETEIRTWVL*

Sequence

>CNT30101533
TTGCTCTCTAGCTTCCCCACCCATCCCTCCTCACTCTGTAGTCCACCCTAAATCCAAGAAACCAGAGTGGGAGAGCTCCTTCTCGCTCTCCTCGCCATCA
TCTTCTTGCCGGCCGCCGGGATGATGCCATCTCCGCCGCCCAACGGCCGATCTCTGGGAACGCCGACCTCGCCACGGTAGCTCTGGAGCGCGGCCACACC
GTCGTCAATGCGCAGCCGCGGGTTCGAGCCGCTGTTCCTGTCGCCTCGAGGCAAATCCGGCTGAGCTACTACGCCACCAGCTTCGCCTCACCATTCTCTC
CAAAAAGCCCCAAGAATCTCTCAGAACCGTGCAGCGAGGAGGGAGATCGACCACCGTCTTCTCCAACTCCGATCTAGTGTCTCCGTCGTCGATTCCCGTT
CAACCGGTGAGCCATTTATCGATTTCTTGCAGTAGTAGCAACCTTAGGTGGTGTTCTACATCCTGCATGTGATGTTCTTGACATGCATGCAAGAGATCGA
GCCGTCCACCATGACGCATCGATGCATGCATGGCGTCCCGAGCGCTTCCAATTGCAGCCGCTACCTGCGTCGGTCCAGTAACCATTGGCTGGGGAAAAGT
TGAGGAATGGAATCGCAATGTTTTGCTCTATATTTTATCTTTTGACCTCGCCCCCATTAGAGCCGCCGTTTGCCGCCAGCGAGCTTGAGATCGAGCTCAG
CCATGGCTGTCGCTGCTTCCTGCTCTTGTGGAGAAAAGCTGGACCTGGTTGCAAGTTTTAGAAATCCCAGGGTTCGACATGCAAAAGTACAGTCCAAAAG
AATAATTGAAAACATATATGAGAATTAGGAAAACTTCAAAAATCCATAACTAATTCATCTTAACTCATTTTTGAGTGAACCAAATTTCTATGTATTCATA
AATTTGTAGTCTTTATGTTTGTAAATTAAAACATTACAACTGCGGTACTGAAAAAGTCACTAAAATTGTGAGTTTCATAAAATACACTTATTTTTGCACC
TAGGAGTTGTATAATCTCTAGGAACTTTATACTATATCCTAAAATTATGAAACCACTTTTGGTTACCTTATAAACATGTAATCTATTATCTGAAAAGGAA
TAATTTGACAAAACTATCTCCTAAAGTAAGTCTAAAACGATTAAGTAATCCTCTTTTTATTGAAGTTGTAAAATTTATAACTAAATATTTTAACTCCAAA
TGTAGTGAACCAAATTTTGTTAGAACCAGTGAGTTATGCTCCATTACTTGAAAATGGTAGCTTGTTAAAACTAGCTAGAAAATGTCAGTTTTTATTTGAC
ATAGGGTAGTTCTTATGTAATTACAGAAATGCCATTTTCAGTGTATATGGCTTGTTATTTTTATATCTCTGAAACCACAAATGTAAATGAGATGATTCTT
GTTTCTAAAACCAGTTTATCATACTCTCTACCTACTGTAATTATGCCATGATTTATAGAGTATGTTGCAAATGCATGTTTATTTAAATCATATTTGCATA
TTTGTCTCTTATCGGTAGATTCGGAGACTTCAGAGTACGTGGAGCAAGACTCTAAGGTTGAGTGTGAGTTCACACAGCAGCAAGACAAGCGTCTGCATAT
TGAACCTATGATTTCACAAAACTTATTTGCTTGCAAAAACTATATATCTATATATGCATAAGTTGAATTGCCTTAAAATGTCGGTAACAGGTAGAGTTGT
TTATATCCAACTAGGTGATACTCTGTGCTTTGCGGCGGGAATTACTAAGTAATCTTTCACATGTTTTTTTTAAAAAGTCAAGCTATTGACAACAAATATA
ATAGTTTGCCAAACCTGGTTATAGTAGAGAGATAAAATTAATATACCATGTAGAAAATTATCAACAGAATGTTAGATTGCTGCTGATAAGGACATCACTT
TGTCGGATACGCACGTAACTTCACACGTTCCAATGATAATTTCAAGTCTAAGTTCAGTTCGGCCTCCGGAGACAGCACTGATTTCAAACGGACCTAGCGC
CTTCATGCCAACTCCGATTTGGGTGATCTTGGACTTCGTGGAAAGCTTATCTCGCTACCTTTCAAACGCAAATGCATCTGGTCTCATGTCCAAATTCATC
TCGAGTCAACGGGGATCGCCAAAACAAGACAGTGCTGTTGCTGAAACCGAAATTAGGACTTGGGTCTTGTAATAGAGTAGGCCTATCTCAGAAGTGTCTC
CCTCGACCTCCACGAATTAGCACTTAACCCTAGCTTTATTTTCCTCTATAAATAGCTTTGTACATCCTCAAAAACATTTGGGGTTTTGTTTAGTTGAATT
TTGCCAAGTGCCATTCACCTTGTCTCTAATCCTCGCTCGATTAGTCAGTGACTATTGATTCAGAGCCCCCAATAGTTGGTGTGTTGATTTGCCGGGTCGA
TTAGATCTACCACTTCAATCGCAACTATTCCTTTGTGCTTAATTACCTATTCGCGATATTTAGATTGCATCTTATCTTGTTCTTGCAGTATTCTCTCGTT
TGCATTGCAGGGATCATCAACTGCGCGTCACGGTTGGTACGACATCGTTTGTGGTGTAGAGGTTGCATGGCGTCCTGGACTTGTTCAGGTTGGTAGTCAC
GTCGCAAACGTCGCACTCGATCAAAGCGAGAGTTATCCCCTCACTAGAAAATCGGGCCACGAGAGAGAGCGTCATCAGTTAGTATCAGAGCATCGGTTGC
CATGTCAGGAATTTAGTTTTGCAATTTTATTTCATCTACCCATCGTCTACCATATAGCCGCACCTTTTCTTTTTCCATCACCAAACATTAGTTTTGAGCC
ACGCAATTTCATTCAGTTTTGCTTTATTGAGTTTCTGTCTACTGTCGAGTCGGAGTGCTGGCTTTAGTCCTAGCATCTCGGTTGTGCTAGGTTGA