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Detailed information on CNT30101519


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XV13|LOX5_ORYSJ, E-value = 2e-104

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30136376Oryza rufipogonLolium perenne10.4225.8493.5177forward

Expression of CNT30101519

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPGPDDGWAAPRGRSGAGRRRGARTLGRPRRAPGGASAAGGSGCSHRAGTARS*

>peptide 2 (35 aa)
EILYIPLIFLLTIPDYLQSTISNVHLSTKNQYFPI*

Sequence

>CNT30101519
ATGAGATTCTCTATATTCCACTTATTTTCCTATTGACTATACCAGATTATTTACAATCTACAATATCAAATGTCCACCTTTCGACAAAAAATCAATATTT
TCCTATTTGAGCCGAAAACTTAGCAATCGACCTATCCGAAGAAAAATTTGCAGCAAAATCATTTACTTTCGCCCAAATTTCTCCCTGTATAATGACCGCG
AAAAATTCGCGCAAATCGCAATAATAACGTCTATATAGTTACGCTGTTTGGCACGCCCCGGCAGGTGATGCCCGGTCCGGACGACGGCTGGGCAGCGCCG
AGAGGAAGAAGCGGTGCGGGTCGGCGACGAGGTGCGCGTACTCTGGGTCGCCCTCGGCGGGCACCAGGCGGCGCATCAGCGGCGGGCGGTTCGGGATGTA
GCCACCGAGCGGGTACTGCCCGAAGTTGAGCGCCGCGTGCTGCGCCGAGCAGAGCCACACCAGGGTGGTGAGCAGGGAGGCCAGGTCGCCGGGCGTCGAG
AGGCGCGGCCACCACGGCGCGCCGCGCTTGTCCGCGTGCCCGCTCTGCACGGCCTCGGCGTACCACGACTGCAGCTCGTAGTCCGCCTGCACGGCCTCGT
CGCTCGGGTAGTAGGCCGCCACGTACGCCTCGCACCACCGCGAGATCGCCGACCAGAGGAGCAGCCCGTCGGCGGCGTACGGGTAGTCCTCGATGAGCAG
CCGTAGCCCGTGCGGCTGGCTCGGGTCCTCCACGGCCAT