Detailed information on CNT30101514


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692798Oryza rufipogonOryza sativa59.2710099.69323forward
CNT30464818Oryza rufipogonSaccharum spontaneum67.3417.0981.47367forward
CNT30132470Oryza rufipogonLolium perenne96.3355.581.14525forward
CNT303809Oryza rufipogonZea mays24.5941.182.09134forward
CNT3067359Oryza rufipogonLeersia perrieri46.6159.9194.49254forward
CNT30352097Oryza rufipogonEragrostis tef2026.1492.66109forward
CNT30576226Oryza rufipogonOryza barthii93.2196.2199.41508forward
CNT30116488Oryza rufipogonOryza nivara10096.2999.82545forward
CNT30604034Oryza rufipogonOryza punctata87.34101.2894.75476forward

Expression of CNT30101514

Peptides detected in this lncRNA

>peptide 1 (41 aa)
LLHLGSHHFISEINLSYSASAPYVAGGCSMLEGGGGGGGAL*

Sequence

>CNT30101514
AATTGCTTCATCTTGGCTCACATCACTTCATCTCTGAAATAAACTTATCATACTCTGCATCAGCACCATATGTAGCAGGAGGCTGCTCAATGCTGGAAGG
TGGTGGTGGTGGAGGCGGTGCATTGTGAGTGGCCCAAGGTGCACTTGCAATGCTCTGTGAGTGATCAGCAGTAGCTGGTGGTGGAGGTGGTGCACTGTGA
GTTGCCCACGGTGCATTTGCAAGGCTCTGCGAGGGATCAGCGCCAGCAGGTGGTGGAGGTGGTGGCGGCTGAACTGGTGTCACCGATGGATAATAAGAGG
CATAACCATAAGGAGGTGGAGGGTACATAGGTGGCGCATTTGGTGCGCCGGAAGTTCCATATACTGGAGCTGGGACAGGCTGAGTAGGTGCACCAGAACT
TGGTGGTGTTACACCAGGAGGGTAGTTCTGCGCCCCATCAGTTGATGGAGCAGTGCCTGGTGGAGGGATTGGAGCTGGTGGTGGTGCATACTGCACACCA
TATGGAGGTGGTGTAGCTTGGCCTGGTGCAGGAGGTGGAGGATTG