Detailed information on CNT30101494


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M8Z7|U80A2_ARATH, E-value = 1e-09

BLAST vs NONCODE:
NONORUT004123, E-value = 2e-177

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692691Oryza rufipogonOryza sativa8290.54100287forward
CNT30289051Oryza rufipogonTriticum aestivum2233.3389.6177forward
CNT30109834Oryza rufipogonOryza longistaminata7850.2894.87273forward

Expression of CNT30101494

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MSNQDIYLQDLRIPGSWMSAEVLFPLLLKVDV*

Sequence

>CNT30101494
CACTCTTTACACAATAAAAGAAAATAAATACACCAAAAGGGAAAAAAATAAAAGATAATAAAGCACACTCTCTCCAGGAAATCCGTTCTCCTGATCCTTG
CAGGGATGTTCAAAATTCTCTTCTTTCAACAGGGAGAAATGGCATTCTTTGTGTAATTGCCTCACTGTCACCTATGAGCAACCAAGACATTTACTTACAG
GACCTAAGAATTCCAGGAAGCTGGATGTCTGCTGAGGTGCTGTTTCCTCTGCTCTTGAAGGTAGATGTCTGAGGAATGCCCTGACTGCACCTGACACACC
ATCTTCAGATTCCATGGCCTTGGCAAGCTCCACGGCATTGTCTTTCACCT