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Detailed information on CNT30101487


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692819Oryza rufipogonOryza sativa76.1364.7598.82338forward

Expression of CNT30101487

Peptides detected in this lncRNA

>peptide 1 (43 aa)
TVAYIRILPEIDGFVEFSPKDRTIRKYINDSQLSNSCYYKYTI*

>peptide 2 (46 aa)
MHACTYKCSVNATMQAAGGGGVGHLPHAQPQALAVVKKRRLMAKRNT

>peptide 3 (40 aa)
MQRKCNYASGRGRRRRAFAARAAAGIGRREEEEVDGQEKHE

Sequence

>CNT30101487
AACAGTAGCATATATAAGAATATTACCTGAGATAGATGGCTTTGTTGAATTTTCTCCAAAAGACAGGACAATAAGAAAATATATTAACGATTCACAACTT
TCAAATTCGTGCTATTACAAATACACGATATAATGACTCCAACTTATTGCAACCTTTGTAAACAGAACAAACGATCAAACCCGTAGCAAATTTATGAAAC
AAATACACACCAATAAGTGTACACTCGATCGACTGGAACGGCTCTAGTTCTGCAGAACCGCGGTGGAACGTTTGCGACAGAAGATCAACGGTGGTATAGC
TATGCATGCATGCACATATAAATGCAGCGTAAATGCAACTATGCAAGCGGCCGGGGGCGGCGGCGTCGGGCATTTGCCGCACGCGCAGCCGCAGGCATTG
GCCGTCGTGAAGAAGAGGAGGTTGATGGCCAAGAGAAACACGAG