Detailed information on CNT30101481


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30108407Oryza rufipogonOryza longistaminata98.3186.6399.14350forward
CNT30151494Oryza rufipogonBrachypodium distachyon73.616.4391.22262forward
CNT30576227Oryza rufipogonOryza barthii89.8994.96100320forward
CNT30603976Oryza rufipogonOryza punctata71.6310098.82255forward
CNT30336357Oryza rufipogonCynara cardunculus28.0923.8784100forward

Expression of CNT30101481

Peptides detected in this lncRNA

>peptide 1 (49 aa)
ITWHPLQEHQRQVVLFHIHDRILMLCDKNLKLHSSVQALSLKHQQIPCV*

>peptide 2 (33 aa)
MCLAASQGEEIISCPFEAFSKASFAFSFSFLNL*

Sequence

>CNT30101481
GAATTACCTGGCACCCTTTGCAAGAGCATCAGAGGCAGGTTGTGCTCTTCCACATTCACGATAGAATTCTGATGCTCTGCGATAAAAATCTGAAACTTCA
TTCCAGCGTCCAAGCTCTTTCGCTAAAGCACCAGCAGATTCCATGTGTTTAGCAGCATCCCAGGGTGAAGAAATCATTTCCTGTCCTTTTGAAGCCTTCT
CAAAGGCATCCTTTGCTTTCTCATTCTCCTTTTTGAACCTATAAGCAATAGCTTTAAAGTAGATATGAAAGTTCTGTCATATACACCACAGGGAAGCAAA
TTGACAGAAAGAAAATAGAACATGGCAAAAAAAGTAACGGACCAGCTTGCTCATAC