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Detailed information on CNT30101467


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002899, E-value = 9e-142

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696611Oryza rufipogonOryza sativa96.5394.3292.93863forward

Expression of CNT30101467

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRYASCVVIALLRAARAMSDLLQLGSCPVVLP*

>peptide 2 (58 aa)
PWAFTPPQDIRWAEKKNPFFFLPFHFPCLFFLFLLKLSPQLTSPPQILSKNPNSSSAC*

>peptide 3 (48 aa)
LGVHPTSGHKVGREKKPVLLPPLSLPLLVLSFPPQAEPPAHFSSPNPI*

Sequence

>CNT30101467
CCTTGGGCGTTCACCCCACCTCAGGACATAAGGTGGGCAGAGAAAAAAAACCCGTTCTTCTTCCTCCCCTTTCACTTCCCTTGCTTGTTCTTTCTTTTCC
TCCTCAAGCTGAGCCCCCAGCTCACTTCTCCTCCCCAAATCCTATCTAAGAACCCAAACTCAAGCTCTGCATGTTAGACCACAACAATCCCCATCATCCA
AGCTTTCCATCCATCCCAACATCTTGCACATGCATGGAGAGTTGAGAGAGATCGAGAAGGAATAAAAGAGTGGTGGTTTCAGCCTGCAGGGCTGCAGCAG
GAGCATTTTGTTTTCCTACATTTGCTAGAAGGTGGCTGCAACTCACCCCGAGTTTATCTCTTTTGATTTCGGTTGAAGCAGCCCTAGGCAACGTCTCTTG
CCGTCAGCCCAAGACCTTGCTCCATCTCTTGCCATCAGCCCGAGGCCTTAGCCTCGCACGACCCTACGTCCAGGTTGCTGCCATGTGAGCGAAGTCCGGT
GGAATTTGGAGAAAAGGGGAGTGAAAATAGAAATCGATTTCTGAGATAGCTTTTGGGCTGAAAGAGATTCGGAGATTCCGGAGAGTAACGAGCCATATCC
CGAGGAGGATAGTGACTACCCTCAGCAACAAGGAGAGGATTCCGGTTATGAGATATGCTTCTTGTGTGGTCATTGCTCTGCTGAGGGCGGCGAGGGCAAT
GAGTGATCTCTTGCAGCTTGGCTCTTGCCCGGTTGTTTTGCCCTAGTGGGGTTGTGGCATCACCGGTTTTATCTTTGGCTTATGAACTCTAATTGAGACT
TCCGCTGCTATATTTATGTGTTGTATGCTGGGACCTCGGACCCTATTATGTGTCATGTACCTCGCTGCACTTTAACCCTATTATGGTACTTGCT