Detailed information on CNT30101397


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676268Oryza rufipogonSetaria viridis32.7216.4497.1871forward
CNT30524047Oryza rufipogonSetaria italica37.3330.3486.4281forward
CNT30243587Oryza rufipogonAvena sativa47.4736.0189.32103forward
CNT30661658Oryza rufipogonTriticum dicoccoides42.418.7883.792forward
CNT30132178Oryza rufipogonLolium perenne47.479.4886.41103forward
CNT30680807Oryza rufipogonTriticum urartu4749.0491.18102forward
CNT30151512Oryza rufipogonBrachypodium distachyon4736.5691.18102forward
CNT30116593Oryza rufipogonOryza nivara47.4727.9199.03103forward

Expression of CNT30101397

Peptides detected in this lncRNA

>peptide 1 (45 aa)
KIKRLMRRKTSYPNYGKFTPSRKRSGQRQSLRHHHGQSQVAWQTS*

>peptide 2 (71 aa)
SKLNASCEGKHHIQTTGSSLHRGRGRASAKASATTTAKARWPGRLLECGRHNLRWQVKVVAQVLNAIVGEVP

Sequence

>CNT30101397
TCAAAATTAAACGCCTCATGCGAAGGAAAACATCATATCCAAACTACGGGAAGTTCACTCCATCGAGGAAGAGGTCGGGCCAGCGCCAAAGCCTCCGCCA
CCACCACGGCCAAAGCCAGGTGGCCTGGCAGACTTCTTGAGTGTGGCAGGCACAATCTCAGATGGCAGGTTAAGGTAGTTGCGCAGGTGCTCAATGCCAT
CGTTGGTGAGGTACCAG