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Detailed information on CNT30101395

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30370038	Oryza rufipogon	Oryza glumipatula	99.65	93.94	98.95	574	forward
CNT30108937	Oryza rufipogon	Oryza longistaminata	27.26	16.27	84.08	157	forward
CNT30576050	Oryza rufipogon	Oryza barthii	100	82.52	99.65	576	forward

Expression of CNT30101395

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MMSASVPPGGAPGHGGARGQGFAPCFWSRLGG*

>peptide 2 (37 aa)
MAVVNRQEATDDGGGVEEEIRKEIMLGSLLEGARLGK*

Sequence

>CNT30101395
GGGATGAACTCATGAAAGAGTGAGTAACCCGAGAAGCTGTCAGTGAGAGAGAGAAGCCGTCGATGGGGGAGGAGGCGGCGAAGCGGCAGCAGCATCCGCG
ATGATGTCGGCGTCCGTTCCGCCGGGCGGAGCCCCTGGTCACGGCGGAGCCCGCGGCCAAGGATTTGCGCCGTGTTTTTGGTCGCGATTGGGGGGTTGAC
GAGTTGTCCCGATACAGCATGGCAGTGGTGAACCGACAAGAAGCCACTGATGATGGAGGGGGAGTGGAAGAGGAGATAAGAAAGGAAATAATGCTCGGAA
GCCTACTAGAGGGTGCGCGATTGGGCAAATAAGCCTAGACATAGGGGCGTGTGTTTGGGCGAAATGCTTGCAGCTTGCGGGGCAGCAGGAGGTGATTTTA
GAGTTTGCTTCAAAAAATAAAAGTAAGTGATCATAATCTATTTGCTTGGTCATGTAGATAGAATCTTATAAAACTAGTTGATACCCTGCGCGTTGCTGCG
GGCATAGAAGTACAATTATCAATGTGCAACATTAGTGCAAACAATCTAAATAAATTTGCTTATAATTTGCTGAGAA