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Detailed information on CNT30101390


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004265, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369953Oryza rufipogonOryza glumipatula9.7537.3889.16203forward
CNT30604548Oryza rufipogonOryza punctata7.7865.0683.95162forward

Expression of CNT30101390

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MVRVGSVRDTWHDDIWRQHWMYCRHPGMEFLNTWSIHRTSPMISG*

>peptide 2 (30 aa)
MRAVPHSCAYGSVCGHMSHGACGLCERHMA*

Sequence

>CNT30101390
CAATTTTGGTGTGATATCCTAACTCAATTAGGATGTGGTCTATGTAATTCATGAGAGCTGTGTACGTATATTTAGTACCACATTGCTAGTTTAGCAACGG
TGTAACCAACTTACAAGGGTTTGTCCTTCCAACCATAACACCTCTAGGTTAACGATTTTACACGAAACATAGACGAAAGTGTAAGTGGGGTTGGAATGTG
TAAGTAGGCCCGCCCATTCGCTGGGCTAGGCTGCATGGTTATGGAGGGCGGGCCATTACTCATGGTATGAGAGCGGTCCCTCACAGTTGTGCGTACGGGT
CAGTGTGTGGGCATATGTCGCATGGTGCGTGTGGGCTCTGTGAGAGACACATGGCATGATGACATATGGCGTCAGCACTGGATGTATTGTCGGCACCCGG
GGATGGAATTCCTGAATACCTGGAGCATACACCGTACTAGTCCCATGATCAGTGGCTAGCACACGCATCCTCAACATTGCTATCACATCCATACATCATA
CTTGACATATAAATAGATAAAGTGGTTATCATAACTTAGCGATTGTTGATGGTCCTTAAATCATAATATCTGACCGTCAATACCTGCATATAATGAAATA
AAACATGGTATCCAACTTAGTGGTAGGTATTATTACTAATCACTTCCACTAGTGTTGGTGAAATATGTGTATGCAGGTAATTTGAGGAGAAAACACATCC
GTCATGCGACAAAATGCACCTCTGCACATTCAGGACACGTTTACACGGATTGGAGGCCCCATAAGTCAATGAAAACCATTTAGAATTGGGCCAAAACATA
GTGCAGGTTATTGGGGGCCCATTAAGCAACTTACCGGCCAAAGGAGAGACCGGGAGGCGAGTTTTTGGGTTCGGCCGAACCATTCCTGGCGCCTCCCGCC
ATCTGCTTCCACGTGGACGGCTTGGATTCCTCCCCTATGGCGGTTGTAGGGTGTTTTGGTCATTTCCGATACCCCTAACCGTCATTTGGAGCCTATATAA
GGAGGTCTTCATCTCACTTCAAGAACACACAACTTTGAGCTGAATTAGAATAGGCTCTATTGTATCTTTTGTACGTTAGAATAAGGTATAGAGAGTGAGG
GGAAGCTCTGGAGGAGTTCCCGGAAGTTTCGCGTTCATCCGACTTCTACCTCGACGAGTGTAGCTTCCTAGGAGGAATTCTAGAGGAGTACTGGAGCTGT
CGGTACACTTTGCTCCAGGTTCGGAGAACCTTCTTCTATAAACTAAGCATCAGTGTTCTTTTCTTATGTTATTTAATTACTTAGTCTGAGTAAGATAGAT
TTCCATCTCTACGGGTTCATTGTTTAGTATTTATACTAAGCGTTCTAGTACTAAGACTCTGGATAGAGAAGGAAGTTCCTGTACAAGTATAAGAGTAGTA
ATTAATAACTTAGACGTGGTGTCTAGGTTAGAGATTACCTTTGTTTATTGTGTATCCCATAGATTTGTCAGAGGTAGGTGGCAGGTGGTGACAGCCTTGA
ATTCCGTTCTAGTAATCCTCCACGTTCGGATACATCATAAAGCTATAGCCGGAACCGTATTGGCAGACCAGCAGGGGTCGGTGCCCGAAGCAACAGATAG
GAAATTATCTTTAACTTAGCTTACATAATTAAAATACATAGAAAGTCATCTCTAGCCTAGCCTATCTACCTATAGTTGTTATCCTTGGATAGTCTTAGCC
TTAGGTAGATTACACACGTTCCATGAGTTCGATATCCTTTTGGGGGTCACCCGAAGGTGAAGTGCTACAGCGGTATTCCGTGCGCTTGCGGATTTATCTG
TAGTCGTAAGAAATACCAATAGCGATGCAAAGTTCTTACATAATAGTTAGGTCGACTGGCCAAATAAAAGAGTTTAAACGCAGCGGAAAAGATAAATATA
CATAAGTTCTTCGGTATGCCCATCTACCAAACCACACAGGCAACCGACTAGGAATCACCCTAGAAAGAACCATCTCGGAAACTCTGGTACCCGATGCAAA
GTAATCGTCACTAGGCACCTCACATCCTGCATCCTAGTCTAAAAACAACAACAAAAGGTGGGTCAATACACTAGGTATTGG