Detailed information on CNT30101301


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002688, E-value = 3e-132

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370178Oryza rufipogonOryza glumipatula15.4384.7799.05423forward
CNT30116578Oryza rufipogonOryza nivara43.8564.2899.251202forward

Expression of CNT30101301

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MKSNPLHAFCLDSWFVALSVYMLFFGSEFVLLEQGK*

>peptide 2 (31 aa)
MGGEERQLCFLKCFSVFLGSLSPSTCLSTDG*

>peptide 3 (31 aa)
MLTHPQVCFVLPSSSYESLLFRYVRLDFPVC*

>peptide 4 (29 aa)
MFFQVKNLDAFSVRTPFSWVHVVYFLLCQ*

>peptide 5 (47 aa)
YRFLLVVSARALSLSFTLAFLFSLSFSPARGREIHRLDRFSPPGFNR*

>peptide 6 (42 aa)
MRERERERERERDVLKGFSDLIWLRDHEMNSLTEDSDTAIFL*

>peptide 7 (39 aa)
MRFALILGLLLFLCICCSLVQNLFCLNKESRTCMMLSGI*

>peptide 8 (37 aa)
MLVSCSCLCFVSAGVELLLCTNLQITCSRSVYILCFV*

>peptide 9 (63 aa)
LSLSPRCLRARSLSFVHSRFLVLSLILSSERERDPSFGSIFSPWIQPVNFHSTFSFCVNEMKD*

>peptide 10 (58 aa)
LIAFSSLSPRALSLFRSLSLSCSLSHSLQREGERSIVWIDFLPLDSTGELSQYLFLLC*

>peptide 11 (90 aa)
MLGKVGRRCHIQRISLAMFFWQTSMVLIRRRGYFPRGAFFTHKLSSVSIVLNDAPTWLMVYTMCVSYFLMMPSKSGMASCQFPCVFLILL*

Sequence

>CNT30101301
CTTATCGCTTTCTCCTCGTTGTCTCCGCGCGCGCTCTCTCTCTTTCGTTCACTCTCGCTTTCTTGTTCTCTCTCTCATTCTCTCCAGCGAGAGGGAGAGA
GATCCATCGTTTGGATCGATTTTCTCCCCCTGGATTCAACCGGTGAACTTTCACAGTACCTTTTCCTTCTGTGTTAATGAGATGAAAGATTGAGAGGGAT
TGCCCAGATAGAGTACATGGATGAGATTATCAGCATATCAATTTTCTGCTTTGTGTGATTTGGGATTAGACTAAATCGTAACCAACGAACTAGGCATCGG
TGGAAACGATGGCTGGATTTTTTTTTTTTTTGCCTTGTCACTGAGCTCGGATTTGTGGCTGGTAGATAGGGATTTTTTTTGTGTTTGATTTGCATTTTTC
GGAGTAAATTGGACATCCTTTTAGCAGATTTACAGGTTTGCTAGGATTTTTCCCCTCTGTTCTGTTCTGTCCTGTACAGGGGATTTTGTTATTTCCTTCT
GTTCTTAACATGCACAACTCCTTCTGTATATGTGATATGCAAGCAGCAGATTTAGTGATGAACTGTGTACTTGTCAAATGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGATGTTTTGAAAGGTTTCAGCGATCTTATTTGGCTCAGAGATCACGAAATGAACTCCCTGACTGAAGACAGTGACACTGCTATATTT
CTATAGATTATTTGCTTGTTCAAAATTTTGCATGGGAGGCGAAGAGAGACAACTCTGCTTTCTGAAATGTTTCTCTGTGTTTCTTGGTTCACTTTCACCC
AGCACATGCCTGAGTACCGACGGATAGCAAATGATGCTTCGTACTAGCACACCATATTTTTCAGGACTGGACTGGGCTTGCATTTGTTTTGTGTAAACTG
CATATACATTCGGCGACGTATTGCACTCCCTGGTTGTTGTAGTTGCATTTTCAAATCTGTGCAACTTCAGTTATAAATTTGTGTAATCATTGATTTGCTT
CTCTGTACAGCTTTTTTATGTGTCTATGCTTGGAAAAGTAGGAAGAAGATGCCACATTCAACGCATAAGCTTAGCTATGTTTTTTTGGCAGACATCTATG
GTTCTGATTAGGAGAAGAGGTTATTTTCCAAGGGGTGCTTTTTTCACACATAAGCTTAGCTCTGTTTCCATAGTTTTGAATGATGCACCTACATGGTTAA
TGGTATATACCATGTGTGTTTCATATTTCTTAATGATGCCAAGTAAATCTGGCATGGCATCTTGCCAATTTCCCTGTGTGTTCCTGATCTTATTATGAGC
ATATAATAACTGTATCAATACTTTTTCAGGTTTGCTCAGTGCCTTATTTTTCTTTTCAATTATGAATGCATCCCAATATTGTTCAGTGGTGCTGATCCAA
ATTAGTTAGCAACAAGCCACTATAAAATCCAGTATTTTCTGGCCTCTCATTGTGTTCTTTTTGTATGTTAGTATCATGTAGTTGTCTGTGTTTTGTTTCT
GCTGGAGTAGAACTCCTACTATGCACAAATCTGCAAATCACTTGCAGCAGATCAGTGTATATTTTGTGCTTTGTGTGATGTGGGGTTAGCGCACAGCGAA
TCGGTGATTTTTTTTTTGGCTTGTCACTGATCTTGGATTTGTGGCTGGTAGATGGGGATTTCCTAGCTCCACCCCAGTAGGATTGGTAGGGGGAATTAAT
TATGACAACATTATATTGCTGATATGTGTCATTTGAATACAGTAGGGGAAGCATCGCTGCAACTTTATCTGAATGTTGCATTCATTTTCAGATATTTAGT
TGACTGATCTGTTAAACGCCTTGCATGTGTTTGAATTTTTCTGCATGTGAAGCATTTTCATTTCAGAGATGATTGATCTGTCAACTCCCTGCGTATATCT
GAATTTTTATGCATATGAAGAATTTCGTTTCACATATGCATGTTAACTCATCCCCAAGTATGTTTTGTGTTGCCTTCTTCATCTTATGAATCGCTTCTTT
TCAGATATGTGCGGCTTGATTTCCCAGTATGCTGAGTTGTTTGGTTAAATGAAATCCAATCCCCTGCATGCGTTTTGCCTTGATTCTTGGTTTGTTGCTC
TTTCTGTGTATATGTTGTTCTTTGGTTCAGAATTTGTTTTGCTTGAACAAGGAAAGTAGAACTTGTATGATGCTTTCAGGAATTTAAGGCTGGTGCTTTG
AATTTTGTCTCTGGGCTAGAGTGGGGAGTCTTGGCTTCATTTTTTTTTTTTTGCTGAATTTGATGTTCTTTCAAGTTAAAAATCTGGATGCTTTTTCAGT
GCGTACCCCCTTTTCTTGGGTACATGTTGTGTACTTTCTTCTCTGCCAATGAAATGAGGCAGAGCTAGCTTCTGACTTTGGATGGACTGTATGGTTCTTA
ATTGACATTTCTGATTTAGTGCATGTTTTATTAGAGTTGTTTTGTGTTTCTTCTTTGGGGAGAGCATGAAATGAGACAAATCTTTAACTGTACTGAATGC
TGAACAGTGCATAGTCTATATATAGCAATATAATCTGCATAGTAAAAGTAAATGTGAAAACATTTTTCTGTCTGGTTTGTGAACCAGCAGTATATTAGAT
TTGCAGCTGCATATACCTTGTATGTCTTTCCATGTTGTATAGCTGACATTTCAAGATTTAATGTCTCCATTAATTCATCTTGAAACTTTTTGAAAATTCC
CAAGTTGTACACCTCCGATGCTTGCAGAAATTGTTATTTAC