CANTATAdb - search

Detailed information on CNT30101286

BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJ52|NHL10_ARATH, E-value = 7e-21

BLAST vs NONCODE:
NONORUT004848, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
nothing found

Expression of CNT30101286

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MYSNIRRANPSSTNRKKQKNPSVHTGSSAG*

>peptide 2 (41 aa)
MPRWTGRRSRGGRSRSAGRRRGRGTRRCRSRGRRACWGCGR*

>peptide 3 (93 aa)
MRMLQRQLKRPHARHLHGQHRHDTARLAEPIAASYLVAPLPRSATEREREREGGIEQQVEEEETMRVCGLCTCLWWIGWVISTPGRGRNDAFII

>peptide 4 (98 aa)
MRSGTNHRNQNQTLQSVRWNAGALGADAGTVMGQLILALGPGTLKAQTLTLSLALSLTSMSNLPAVCCDLKLAAVMSPWSGCWPLKAGESLVDASVDW*

Sequence

>CNT30101286
ACAACTCAGAATCAACCAAGGAATCATAATAGATGTCACTCATAGAAGTAATAGGTGATCCTGAATAAAATCTCTGAATGTATCAACCAACATATAGTCA
TATATGATCTGAACAGCAGTAAGTAAGCCGTACCCAAAAGAAAGGGGAAAAAACTAAGAAGAACAAGACATGGATCGATAATATGTGCATGACAAGCGCT
AGCTACAAGGGCTAGAAGATATGTAACCACCTAAACCACAGCGATGTACAGCAACATCCGGCGAGCTAATCCCTCATCAACAAATCGAAAGAAACAAAAG
AATCCATCCGTCCATACTGGAAGCAGTGCTGGCTAATAGTAATCCCCAAATGCGAAGCGGAACCAACCATCGAAATCAGAACCAGACTTTGCAGTCGGTG
CGCTGGAATGCGGGGGCGTTGGGGGCGGACGCTGGGACGGTGATGGGGCAGCTGATCTTGGCCTTGGGTCCGGGAACCTTGAAGGCCCAGACCTTGACCC
TGAGCTTGGCGTTGAGCTTGACCTCGATGTCGAACTTGCCGGCGGTCTGCTGCGACCTGAAGTTGGCGGCGGTGATGTCGCCTTGGAGCGGCTGCTGGCC
CTTGAAGGCGGGGGAGAGCTTGGTGGATGCCTCGGTGGACTGGTAGAAGGAGTCGAGGGGGGCGTAGCCGAAGCGCTGGCCGTCGAAGAGGGCGAGGGAC
TCGACGTTGTCGTAGTAGAGGCCGACGCGCTTGTTGGGGTTGCGGACGGTGAGGTCGACGGTGAGGCTGTAGGCGAGGGCGGAGTTGGTGGAGAGGGTGA
ACTGGGTGAGGGCGGCGGAGGTGACGAGGAGGGAGATGAGGATGCTGCAGAGGCAGCTGAAGAGGCCGCACGCCAGGCACTTGCACGGGCAGCACAGGCA
CGACACCGCGCGGCTCGCCGAACCCATCGCCGCCTCCTACCTTGTTGCCCCCTTGCCGAGATCTGCGACGGAGAGAGAGAGAGAGAGAGAGGGGGGAATT
GAACAACAAGTGGAGGAGGAGGAGACGATGCGGGTTTGTGGTTTGTGTACGTGTTTGTGGTGGATCGGGTGGGTTATAAGTACTCCAGGTCGGGGTCGCA
ACGACGCGTTTATAATAAT