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Detailed information on CNT30101185

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30692910	Oryza rufipogon	Oryza sativa	62.04	10.67	99.23	389	forward
CNT30186563	Oryza rufipogon	Secale cereale	21.53	19.62	87.41	135	forward
CNT30150700	Oryza rufipogon	Brachypodium distachyon	16.27	22.77	85.29	102	forward
CNT30594208	Oryza rufipogon	Eragrostis curvula	16.75	37.37	83.81	105	forward
CNT30551913	Oryza rufipogon	Oryza brachyantha	17.7	23.17	82.88	111	forward

Expression of CNT30101185

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MSAAGAFSSPSATSSTYAIFPSFTYRAAFSSYSLYLALWTGSGCSRLYCEIIPQAATRPRTRMLSSTASSIAPPTFSK*

Sequence

>CNT30101185
GAGCAATAGAGCCAAATCACTTTAATCTTGTCTTACTGTGTATCCAAAACAACTAAACACTTGTTAAAACACACCGTTATTGATGTTCAAGATACAAAAT
CCAACGCATTCAGCTAAGCTTGACACATCTAAACACAGCATCAGCCATCAGGACAATGCACAGCACTAGTGAAGTGTAACCATACCGCTACACGTTTAAC
TACACATCTCGCGGTTACTCCCTGGCGACGACGACCACCTGCTTGCCGACGTTGCGGCCGGAGAAGAGCCCGATGAGCGCGGCCGGCGCGTTCTCCAGCC
CTTCGGCGACGTCCTCCACGTACGCGATCTTCCCCTCCTTCACATACCGCGCGGCCTTCTCCTCGTACTCCCTGTACCTGGCGTTGTGGACGGGGTCGGG
GTGCTCCAGGTTGTACTGCGAGATCATCCCGCAGGCCGCGACGCGGCCGCGCACCCGCATGTTGAGCAGCACGGCGTCCAGCATCGCGCCGCCCACGTTT
TCGAAGTAGATGTCGATCCCTTCCGGGAAGCACCGCTTCAGGGCCGCGCTCAGGTCACTCTCCTTCTTGTAGTTGAAGGCGTCGTCGAAGCCGAACTTCT
CCCTGAGCAGCCTCACCTTGTCGTCGG