Detailed information on CNT30101167


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693329Oryza rufipogonOryza sativa10094.5699.82556forward
CNT30386928Oryza rufipogonTriticum turgidum25.5418.7692.96142forward
CNT30553378Oryza rufipogonOryza glaberrima98.9210099.27550forward
CNT30659552Oryza rufipogonTriticum dicoccoides25.5436.2292.96142forward
CNT30116528Oryza rufipogonOryza nivara62.2375.7199.71346forward

Expression of CNT30101167

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MHTCKCAMERRQIERTVRRVPLGAASAAAASAVATDGVVAALLGGLAALLEVALVVLLGGVEPPRREDLRHDLLLPL

>peptide 2 (72 aa)
MCNGTPANRAHGPASAARGGVGGGGVSRSNGWGRCSSSWRTGRPSRGSAGGTPRRGRTSSPGGSPSRSSPSTP

Sequence

>CNT30101167
TTTGAATTCTATGAAATTTCTAAATAAATCCTGTGATTCAAATGGCCCTATTTTATGGCTGCTAACTGACTCAACAACCAGCTGAAAATGTACATCATTA
GTTCATCCCACAAAAGGAAATAACGCGTGCGTCGATGATCAGGTAATGAAGCAAATACAGCATAACTATACTGCACCTTGACAAGCAGTGCGTTTATTGT
AACACAGATATATATACTCCCACAGTTTCAAACTTTCAATGGCACAATCGCGTACACCGCGACTTAGAATTTGCAGGTTCCTTTGACGAGTTTACGATAC
CGGTAGTTATTACTACAGTAAACATGCACACCTGCAAATGTGCAATGGAACGCCGGCAAATCGAGCGCACGGTCCGGCGAGTGCCGCTCGGGGCGGCGTC
GGCGGCGGCGGCGTCAGCCGTAGCAACGGATGGGGTCGTTGCAGCTCTTCTTGGCGGACTGGCCGCCCTTCTCGAGGTAGCGCTGGTGGTACTCCTCGGC
GGGGTAGAACCTCCTCGCCGGGAGGATCTCCGTCACGATCTTCTCCTTCCACTCCT