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Detailed information on CNT30101131


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000672, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555766Oryza rufipogonOryza glaberrima21.1913.7593.35466forward
CNT30116995Oryza rufipogonOryza nivara63.364.4487.211392forward

Expression of CNT30101131

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MNSPSPLVLFFCFYLCIISLFQKNNYFNNKSIFPSEDPCP*

>peptide 2 (28 aa)
MHKITQIFQNFQIVSIYLVIIIRFIPIPI

>peptide 3 (48 aa)
MVSYNQFSLKTSGTPELLSLLITLRSERMGTRVHGTGTTNVSNRKALP*

>peptide 4 (40 aa)
MEQVPLMLVTEKLCHDKANVFGTSWIVGKAYIYCFLKLFE*

>peptide 5 (43 aa)
MNLDWNSMVEMVDFQVASTVPTDIKLPSTCEEHTSMTAILVWA*

Sequence

>CNT30101131
TTTTATTGAATTTGGTTCTTCGTCTTTCTTAGTAGAGTCTATTATCTTTTGGATGGCAACCTGTGGTATTTCGAGGATCGGATAATCAGGTTGCTTATCT
TGAATTTATTTGCGTTGGAGCAAGGCAAGTTATTATCTCTCTCCTTTGAGCATAATTATCCTATATTCTATATCTCCATTATCTCATGCATTAGTCATTC
ATGATTTCGAATGCGTAACCTGAACATAGCAAACCAGATATGCTAGCTTTGCTTAGCCCTGCCTAATTAGACTGCATAAAATATAATGAACTTAGATTGG
AACAGTATGGTAGAAATGGTTGATTTCCAGGTGGCTAGTACTGTTCCAACCGACATAAAATTGCCAAGTACATGTGAAGAACATACGAGTATGACCGCAA
TTCTCGTATGGGCATAGACCTAGCTGATTAAGTTATCTAGCAAAGGTGGTACCTCTGTATAGTGGTTTTTCTTAAGTCCTCGCGCAGGAGGCAAATTTAT
GCCGCGAAGGGCAACTGTGATATTTATCGAGGCGCAGGTAAATATATGAGATGAATTGTGCACAAATTGTTTGTGAACCCTGATTGCGATGACATGGTGT
CATACAATCAGTTCTCTCTAAAGACCTCGGGAACGCCAGAACTCCTCTCGCTGCTGATAACGTTACGTTCAGAGCGCATGGGGACTAGAGTTCATGGAAC
AGGTACCACTAATGTTAGTAACCGAAAAGCTTTGCCATGACAAGGCTAATGTGTTTGGCACGTCATGGATTGTGGGTAAAGCGTACATCTACTGTTTCTT
AAAACTATTCGAATAGCCGTGCTCGCGGTTATCGGGCATTGGGACTCACAATGGCATCTTGGTTAGAAACATAATTCTAGATTTTATTAAATACTGTTGC
CTTATAAACATTATAGACTTTCTACTTCTACATTCTCAACTTTCTGCAATTAAACCTAGCTCTACACATATATTACCATTTTATGCATTCATTGTTGATT
AATATAATAGCTTGCTGAGTACGTTGTACTCACCCTTGCTTTAACCCCCTTCTTTCAGAGTTAATTTGGAATTCTTACCGAAGCCGGGAGTTCAATTATA
TAAGTTAGTCTTATATAAGTTAGTCTCATCTCAACCTAATTCGCAAATATAGATTAGATAGATGGTTTAAGTCTATAGCCAAACATTAGGGTCAAGTCAT
TCTATAGCTTCTGTTGTAATAGTTAGCCACAACCTTGTAAATACCCTATTATATCACATAAAGAAGTCTCCTTTGGAGCCTTGATCAAATGTATGCAATG
AAGATCCAGATTGTTGAACCTGTATCAATCTACTGATCCAGGGCTTGATACAGTTAAACATGTCGGTTTCCGAATCATTAGTTCTGGGACCCGACAGCGT
TGATATCAGAGCATATGTTTTACTAGAGCCTTAAACCCATAGGTTTTCTAACCCCCTTCATGAGTAACTTTCCCACCTATATAGAATAATTAGGTTAAAA
ACTGAAAATTTGCCTAATAATTTTGCTAAGGCCTTTATTAGAATGAACTCCCCTTCACCGTTGGTTTTATTTTTTTGCTTTTACTTATGCATCATATCTC
TATTTCAAAAGAATAACTATTTTAACAATAAAAGTATATTCCCCTCCGAAGACCCTTGTCCTTGATATTTCAAGAAAGTCAGTGGGTACAAGCCTTTGAT
TATGCCAGCATGAGCTGAGTTTATTGCAATCCAAGCAACTAAGAATACAAGTTCTGAGGAATTATTTGGTGAAGCAAATATGTGTCCATATTGTCAATAT
AATAGAAGAATATTGGAATATAAGTGGATTTCTTTAAGGGGGGGTAGTTCAATATAAGAACTATCAGGATTCAAGGAGCCGTTATATTTGAACATGAACA
AAGTCTTGAAGCTCATATCGTGAAGAAGAAAGAAGGGATGCATATTACGAAATTTTGGAATTTTGATAAAAGAATCCTTTGAGTAGTATTTATGAAAATA
TTGTCTATTCAGGCAGAAATGATCGAAGACATTCTAACAGTTTACAAGACATTATATATATATATATGACACTCATATAGGGCACCATGGTGCCCGGGCA
CCATGGTATCAAATGCATAAAATCACTCAAATTTTTCAAAATTTTCAAATTGTGAGTATATACCTAGTTATAATAATTCGATTCATACCTATACCTATC