« Back to Oryza rufipogon search


Detailed information on CNT30101020


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 1e-22

BLAST vs NONCODE:
NONGMAT000508, E-value = 1e-13

Expression of CNT30101020

Peptides detected in this lncRNA

>peptide 1 (70 aa)
EIFKIAASQIQKWISAYNISKRPMDHFLEDSKSDVLIKRENDSFNPTIHSLCTSRNNEVVQFPQRNPKQR*

>peptide 2 (34 aa)
MPWMLSRSTFLCRFAPPLPRPLPPLPRPDMTDDA*

>peptide 3 (40 aa)
NFQDSRLSNSKMDQRIQHFKATNGSFFGRQQVGCTNQERK*

Sequence

>CNT30101020
GAAATTTTCAAGATAGCCGCCTCTCAAATTCAAAAATGGATCAGCGCATACAACATTTCAAAGCGACCAATGGATCATTTTTTGGAAGACAGCAAGTCGG
ATGTACTAATCAAGAGAGAAAATGATTCATTTAATCCAACCATCCATTCACTTTGCACAAGCAGAAACAACGAAGTAGTACAATTTCCGCAACGAAACCC
TAAGCAACGCTAACGGCATCAGATCTGGATCGAGCACAGGGGGCCGGGAACTCAGCCGCCGAAGCCGTAGAGGGTGCGGCCCTGGCGCTTGAGCGCGTAG
ACGACGTCCATGGCGGTGACGGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGCACGCCGCGGGTCTCCTCGTAGATGCGCTTCACGCCGCCCCTCC
TAGCCGCCGGATCGCCGGCTTGGTGATGCCCTGGATGTTGTCGCGCAGCACCTTCCTGTGCCGCTTCGCGCCGCCCTTGCCAAGACCCTTGCCTCCCTTG
CCGCGGCCCGACATGACTGACGATGCGTAAGAGCTCGAGGTGGAAGACGAAGACGATCTGGAGGATTTGGGGATTTTGCTTGT