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Detailed information on CNT30100941

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30692082	Oryza rufipogon	Oryza sativa	90.33	19.01	98.85	523	forward

Expression of CNT30100941

Peptides detected in this lncRNA

>peptide 1 (51 aa)
TFFLFSPFLPFSFSPSRSPSPSAAVSQAVPSLSPAPAATPHSGDPSSRRRP*

>peptide 2 (62 aa)
PSSSSLLFSRSLSLPHALPVPAPPFPRQCRRSPLRRLPHPTPATPLAVAGLNRFLGSSLLCP*

>peptide 3 (45 aa)
LLPLLSFSPVLFLSLTLSQSQRRRFPGSAVALPCAGCHTPLRRPL*

Sequence

>CNT30100941
ACCTTCTTCCTCTTCTCTCCTTTTCTCCCGTTCTCTTTCTCTCCCTCACGCTCTCCCAGTCCCAGCGCCGCCGTTTCCCAGGCAGTGCCGTCGCTCTCCC
CTGCGCCGGCTGCCACACCCCACTCCGGCGACCCCTCTAGCCGTCGCCGGCCTTAATCGGTTTCTTGGCTCCTCGCTTCTCTGCCCCTAAGCTAACCCCA
GCCACCGGTCTCCTGCCGCTGCAGCCGCCGTGGAGATGGCCGGTGGAAACACAGGCAACTCCGGTGGCTGCATCCCTCTCCTCCATAGCTGAGCTACCTA
TTCCATCCTCCCATCTCTGATCCCTATTGTGATATACACTGGTGTGGTGTCCTCTCTTGTATGGTGTTGTTTGTAAACGGTGATGTACTGGTGATGCTTG
TGAATTTGTCCGAATGATTATACTTTTAGGGTTGTATTTACTGGATCTAGGGTTCTAGAGAAATTGGCTTGCTAAGATGGATGATGCCTATATGTTCATG
ATGAATGAATGCTGACATGAATAGAAATCACACTAGCATGATTAAATCCTTAATTATGCTTATGCAATGACCATCGAAA