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Detailed information on CNT30100901

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30116257	Oryza rufipogon	Oryza nivara	99.8	88.21	99.41	509	forward

Expression of CNT30100901

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MRLCKWILCQVEDRTPRHQLAHSLGQHTVHFSCTVYWISTERRLY*

>peptide 2 (35 aa)
GGVCMLPLQWMGKNLAMQLSFYRRGRGRFAMSVCP*

>peptide 3 (37 aa)
MQVDTMSSGRPNPKASTSPFTWTTHCPLQLHSILDKH*

Sequence

>CNT30100901
GTGGTGGTGTGTGTATGTTGCCGTTGCAATGGATGGGGAAGAACTTAGCAATGCAGCTGAGTTTTTATAGAAGGGGGAGAGGGAGGTTCGCGATGTCAGT
GTGCCCATGAGTATTGGCTACTAATGCGACTATGCAAGTGGATACTATGTCAAGTGGAAGACCGAACCCCAAGGCATCAACTAGCCCATTCACTTGGACA
ACACACTGTCCACTTCAGCTGCACAGTATACTGGATAAGCACTGAACGAAGACTGTATTAACTTATTAGCAGTTTGAAACGTATTTGATGCCCGTGCCAA
GCAACTAAACAAGAGGCCTTCGAATTGTCATTGACGAAGACCTGAGCTACGGGCCTAAGGTGTGTCCATGTTTTACTCCAGTTTGGATCATGTGACCGGC
ATCTTGGATCTTGCCAATTGCAGTCCCAGAAATTCAGGTAGGAGCAAATGAAATGAGGAGCATATGCAAATTGGGACTATCTTTAGGACACGTTTGCAGG
CAGGATTATT