Detailed information on CNT30100822


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534621Oryza rufipogonEucalyptus grandis23.645.5291.861forward
CNT30378674Oryza rufipogonArabidopsis thaliana90.3111.0792.27233forward
CNT30618774Oryza rufipogonSesamum indicum89.152.2990.87230forward
CNT3098426Oryza rufipogonSolanum tuberosum66.6720.3395.35172reverse complement
CNT30592653Oryza rufipogonMusa acuminata88.769.5591.27229forward
CNT30127270Oryza rufipogonCorymbia citriodora21.322.5790.9155forward
CNT30680520Oryza rufipogonTriticum urartu99.618.8898.05257forward
CNT30341981Oryza rufipogonEragrostis tef63.1823.7389.57163reverse complement
CNT30578173Oryza rufipogonOryza barthii99.617.5798.44257forward
CNT30115142Oryza rufipogonEutrema salsugineum24.8115.7295.3164reverse complement

Expression of CNT30100822

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MFPFFHSQVKGESHASVCGSRSHALISTGAHSRPAALPKPIIISVPRPHCWKGSASKPYVELPPHTTP

Sequence

>CNT30100822
TCGTCCCTCTCGCTGTAGGGCGGAGCCCCCTCGCCTTGCTCTTGTGACATGCTATGTTTCCCTTCTTCCATTCTCAAGTCAAGGGTGAGTCCCATGCGTC
AGTTTGTGGATCGCGGTCTCACGCACTAATCTCTACAGGTGCCCATAGTAGGCCGGCCGCCTTACCTAAACCAATCATCATATCGGTCCCTAGGCCCCAT
TGCTGGAAAGGCTCGGCTTCAAAACCGTACGTTGAGCTTCCGCCTCATACGACTCCTC