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Detailed information on CNT30100814


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692054Oryza rufipogonOryza sativa77.5746.13100716forward

Expression of CNT30100814

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MLSEAELALFLVLEGQRKCHRYSSWHWQIVGSSWSLAQRVSLIHPYHLHCSLERLQDVFLRVLPVSILL*

>peptide 2 (42 aa)
DLPPETWLSDSSSWLSSDLANSNSASASAVFPSLRNLSALRL*

>peptide 3 (34 aa)
MSSVQLLALADCWIKLVSCTTGFIDSSLPFALFS*

Sequence

>CNT30100814
CGACTTGCCTCCAGAAACCTGGCTTTCTGATTCTTCCAGTTGGCTCTCCAGTGACTTAGCCAACTCGAATTCCGCATCTGCTTCTGCGGTCTTTCCTTCT
CTCCGCAACTTGAGCGCATTGCGTTTGTGAGCAAGGGATTCACGTTGGATTTTGAGACGGTCTCGACTAGACAATGCTTTCGGAGGCTGAACTGGCTTTA
TTTCTTGTGCTGGAGGGGCAGAGGAAATGTCATCGGTACAGCTCTTGGCACTGGCAGATTGTTGGATCAAGTTGGTCTCTTGCACAACGGGTTTCATTGA
TTCATCCCTACCATTTGCACTGTTCTCTTGAGAGACTTCAAGACGTTTTTCTAAGAGTTTTGCCTGTTTCAATTCTTCTCTAGCTTCTGCCATTTTACCT
TCCCTCTTAAAAGCAACTGCTTTTCTCTTATGATGTAAGATTTCATCTTTGAGAGTGTCATGTCCGTGCGGAATCTGAGGTGAATGCAATCTTTCTGCTG
TTACCAGCGGATCAGTAAAGGATGGCCGGGACAAGGTTGAACGTGTTCCTTCAGAATGAACTTTTGATGCATGATCTGGTTTAGGAATGATTAGTTCGGT
CGGTGGTATGCTTTGGGAACTAGCTTGAGCATCCAGAGATGCAGCAAGTTCAGCAGCATGCACTGGCAACGAAATAACTCCCTCCGTTGCATTTCTTAGT
TTAGGCAGGTGTGCACTAGTATCAGGACTGGAGGCAGGATCAAGTAGAGCACCAGACTTATTTCCCCTAATTTGTCCAGCAGACCTTGCACTTTGTTGAC
TAGCAGTCAAGTTAACTGACTCTTCCATCTCTGACAGTTGCTGCTCCAAGACCTTTGCCTTCTCAAGTTCCTCCTCAGCTTCTGTGTTCTTTCCTTCCCG
TCTGAATGCAAGAGCTTTCCTTT