Detailed information on CNT30100783


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691929Oryza rufipogonOryza sativa81.7460.75100291forward
CNT30552938Oryza rufipogonOryza glaberrima84.2753.8699300forward
CNT30575585Oryza rufipogonOryza barthii82.364.6899.32293forward

Expression of CNT30100783

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MPRKRASGGRRSKHTLSISSKRYYQITRYQITVQDMYTRTNSDRSWMV*

Sequence

>CNT30100783
AGTGGGGATAATCACATAAGAGAACTTGGATAAAAGCTCTTTAAATTTACAGAAGGCAACAGAGATGAATTTATTGACGCTTGTACACTCAGAACGACGA
AACACGGGCTGATAGCAAAGCTACAACAAACGAAAATGCCAAGAAAACGTGCATCAGGAGGCAGGAGGTCCAAACATACATTATCCATCTCCTCAAAACG
ATACTACCAGATCACCAGATACCAAATCACCGTACAAGACATGTACACAAGAACGAACAGCGATCGGAGCTGGATGGTGTAGAGAAGCGCTGAAGCGGTG
CTCGCAAACAGGTTCGGGGCAACAGCAATGAGAAGGATCACAGCACCAGGCAGCTC