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Detailed information on CNT30100775


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30344263Oryza rufipogonEragrostis tef33.5230.4380.77234forward
CNT30603900Oryza rufipogonOryza punctata88.483.9593.19617forward

Expression of CNT30100775

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MPSSEPQSGIEMLTSNVLESHGGCFKNSSRVMHILLAATWMVTVDPAARRTVAMSDEKDNLCAMMMLPPMVAVFRTNGEATLLR*

>peptide 2 (60 aa)
MEVLILVHSGAGVRCHNLHRPFIEQVRVKQPVELLDALGVEPAVSGDRHRRSATIRLTHG*

>peptide 3 (37 aa)
MALEIDTTAPISTPLLLLLMAESSRICEMLMYLSWRS*

Sequence

>CNT30100775
CACTGAACTTCTTGCCAAGAATGCAGAATTAACATATGACACAGCATTGCCAAGTGGACGAGGAGCCGCACGAAACGTCTGAAAGGTGATGCCATCATCT
GAACCCCAATCCGGGATAGAGATGCTGACCAGCAATGTCCTGGAATCACATGGAGGCTGCTTCAAGAACTCCTCCAGAGTGATGCACATCCTCTTGGCGG
CCACCTGGATGGTGACAGTTGATCCTGCAGCGAGAAGAACAGTTGCGATGTCCGACGAGAAAGACAACCTCTGCGCCATGATGATGTTGCCTCCAATGGT
CGCCGTGTTCCGGACGAACGGCGAGGCCACTTTGCTCAGGTGATCGGCAATCTTTCTGAACACTGCGCCTCCATCCGACAATATCTCAATGGCTTTGGAG
ATAGACACGACAGCTCCGATCTCGACGCCCTTGCTGCTTCTATTGATGGCTGAGAGTTCCAGAATCTGCGAGATGTTGATGTACTTGTCATGGAGGTCTT
GATCCTTGTACACTCCGGAGCCGGTGTTCGATGCCACAATCTTCACAGACCTTTCATCGAACAGGTTAGAGTCAAACAACCTGTGGAACTCCTCGACGCT
CTTGGGGTGGAACCAGCCGTCTCCGGTGACCGCCACCGCCGGAGCGCCACCATTCGCTTGACCCATGGATGACCTTATCTCCGACTTGAGGAACTCCG