Detailed information on CNT30100768


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 3e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552993Oryza rufipogonOryza glaberrima77.0794.9196.12541forward
CNT30447822Oryza rufipogonSaccharum spontaneum31.0532.281.19218forward
CNT30684877Oryza rufipogonTriticum urartu31.234.5487.67219forward
CNT30369831Oryza rufipogonOryza glumipatula73.584.1895.54516forward
CNT30105280Oryza rufipogonOryza longistaminata86.1896.9690.91605forward
CNT30575695Oryza rufipogonOryza barthii84.4793.3995.62593forward

Expression of CNT30100768

Peptides detected in this lncRNA

>peptide 1 (63 aa)
DRWIEQELASTVCVELTGMQKRRDAVRTDAYTMRSIEYKLINQLCRYTYTSRRMKHALITSWN*

>peptide 2 (86 aa)
MLARRAVQRHTAASRSARPWMRLQHGCRGGVPSCTFISPFSTFAHTPSFSVSIGHLPPPPPPPLPPPPPPPLPPPPEPPPPLPPPPE

Sequence

>CNT30100768
GGGACCGATGGATCGAACAAGAGCTAGCTAGTACAGTATGTGTAGAATTAACAGGCATGCAGAAAAGACGAGATGCAGTACGTACTGATGCATATACGAT
GAGATCCATCGAGTACAAATTAATTAATCAATTATGCAGATACACATATACAAGTAGACGAATGAAGCATGCTTTAATTACGTCGTGGAACTGAATCATA
TGCATGCATATATATCTCATTAATTTACGGGATGAAGGAGGAAATTAAGGCACGCAGATACATATGATGATTTGAACAAGGAACAAACTAGACATAGATA
GATATATAGTTGTACGTGGCCTGGTGGTCGTTCTTGTGTGTAGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGGAAGCCGGA
GGGGACGGAGCGGCCGCAGTAGTTGACGAGGAGGCTGAGGATGTTGGCGCGGAGGGCGGTGCAGAGGCACACGGCGGCCTCAAGGTCGGCGAGGCCCTGG
ATGAGGCTGCAACACGGCTGCCGCGGCGGCGTCCCCAGCTGCACGTTTATCAGCCCATTCAGCACGTTCGCGCACACCCCCAGCTTCAGCGTGTCGATCG
GGCATCTTCCTCCTCCCCCGCCGCCGCCGCTTCCTCCTCCTCCGCCGCCTCCGCTTCCTCCACCGCCTGAACCTCCGCCGCCGCTTCCTCCTCCACCTGA
AC