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Detailed information on CNT30100765


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 3e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30116368Oryza rufipogonOryza nivara51.0681.3897.63507forward

Expression of CNT30100765

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MLARRAVQRHTAASRSARPWMRLQHGCRGGVPSCTFISPFSTFAHTPSFSVKKRRFRARSVAITPAFVAMPTHRTAPADRSRSMAWPLPSFAC*

>peptide 2 (64 aa)
WDRWIEQELASTVCVELTGMQKRRDAVRTDAYTMRSIEYKLINQLCRYTYTSRRMKHALITSWN*

Sequence

>CNT30100765
TGGGACCGATGGATCGAACAAGAGCTAGCTAGTACAGTATGTGTAGAATTAACAGGCATGCAGAAAAGACGAGATGCAGTACGTACTGATGCATATACGA
TGAGATCCATCGAGTACAAATTAATTAATCAATTATGCAGATACACATATACAAGTAGACGAATGAAGCATGCTTTAATTACGTCGTGGAACTGAATCAT
ATGCATGCATATATATCTCATTAATTTACGGGATGAAGGAGGAAATTAAGGCACGCAGATACATATGATGATTTGAACAAGGAACAAACTAGACATAGAT
AGATATATAGTTGTACGTGGCCTGGTGGTCGTTCTTGTGTGTAGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGGAAGCCGG
AGGGGACGGAGCGGCCGCAGATGTTGGCGCGGAGGGCGGTGCAGAGGCACACGGCGGCCTCAAGGTCGGCGAGGCCCTGGATGAGGCTGCAACACGGCTG
CCGCGGCGGCGTCCCCAGCTGCACGTTTATCAGCCCATTCAGCACGTTCGCGCACACCCCCAGCTTCAGCGTGAAGAAGAGGAGGTTCAGGGCCAGGAGC
GTGGCGATCACCCCAGCTTTCGTCGCCATGCCCACCCACCGCACTGCACCTGCAGATCGATCTCGATCTATGGCCTGGCCTCTACCTAGCTTTGCTTGCT
AGCCAGTGTATTCAGATACATCTATGGACCAAGGGGTGCACTCATATTTATAATAGGATCGGAGTACCTTCAATTACTTAACCAGCTACCACATCACTTA
ACTAACTAATTAACTAATCGGATTTTAACTAGGATTTCATCTTAGGTGCAGCTCACATCACTACAGCGTAACTACTACTAGTGACCTAGCTAGCTAGCTG
GCCTGGAGTACATTAATTCATTGGAGTATAGTGCTACTAGCTAGTGGGCTTTTGGTAGCTTAGCTGGCCGCAAGGACGATTGAGTTGGAGGCC