Detailed information on CNT30100754


BLAST search results

BLAST vs Swiss-Prot:
sp|P00155|CYF_PEA, E-value = 5e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30199947Oryza rufipogonPisum sativum11.5444.2584.67150forward
CNT30556029Oryza rufipogonOryza glaberrima1160.34100143forward
CNT30242926Oryza rufipogonAvena sativa19.0823.292.34248forward
CNT3018021Oryza rufipogonZea mays32.0810.7495.68417forward
CNT30623404Oryza rufipogonDaucus carota17.3884.6479.65226forward
CNT30367017Oryza rufipogonSorghum bicolor9.3131.0395.87121forward
CNT30575628Oryza rufipogonOryza barthii21.2394.5297.1276forward

Expression of CNT30100754

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MGYAFEIDVRVITYIMIDTEIDRVICSFTQEKVFLFSMSNHRSRNFYNKLDR*

>peptide 2 (59 aa)
MNVFLHSRVGGKNGKDDFTIFLTGNRAYHKNIFFIGTITLKREISYLFFQLRRNTVGRR*

>peptide 3 (30 aa)
RSITWRPSDPSTMDISYPLFFTQYFSYYTC*

>peptide 4 (42 aa)
KINHLASIRSIDYGYFISPFLYAVFFLLHLLTLHYSCYSCYH*

>peptide 5 (34 aa)
DQSLGVHPIHRLWIFHIPFSLRSIFLTTPVDVAL*

Sequence

>CNT30100754
AAGATCAATCACTTGGCGTCCATCCGATCCATCGACTATGGATATTTCATATCCCCTTTTCTTTACGCAGTATTTTTCTTACTACACCTGTTGACGTTGC
ATTATAGTTGTTACTCCTGCTACCATTAGGATAGATCTGTCCCCTTCCACGGTTTCCCCCCACATATATAGGATATTTTAAGAAATGAACGTCTTTCTTC
ATAGCAGGGTCGGGGGAAAGAATGGGAAAGACGATTTCACTATATTTCTTACCGGGAACAGGGCCTATCACAAGAATATTTTTTTTATTGGGACGATAAC
TCTGAAAAGAGAGATTTCCTATCTTTTCTTTCAACTCAGGAGAAATACGGTCGGGCGGCGCTAATTCGAATCCCTCGGGCAAAATAAGAACATCACCCAC
ATTCAACCCTCCCTTTTCCCCGTGGGACGATAACTCTGAAAAGAGAGATTTCCTATCTTTTCTTTCAACTCAGGAGAAATACGGTCGGGCGGCGCTAATT
CGAATCCCTCGGGCAAAATAAGAACATCACCCACATTCAACCCTCCCTTTTCCCCGTTAGCAAGAACTTGTTTCAGTTGCATATCATAAGGAATTCGAAG
AACTGCTTCAAATACAGTATCGGGAAGCACTGCTTGGGGAACTTTAATATCCACAGGCTTATTCGCTAAATGGCAATTGTCACATACAATTCGTCCAGTT
GCTTCTCGTGGGTTTTCATAACCTTGCTGCGCAAAAATGGGATATGCATTTGAAATAGATGTCCGAGTTATTACGTATATCATGATCGATACAGAAATCG
ATCGAGTCATCTGTTCCTTTACCCAAGAAAAAGTATTTCTATTTTCCATGTCCAATCACAGATCCCGGAATTTCTACAATAAATTAGATAGGTAGCTAAG
CTAATCTAGTTCCCTATACACGAATCTGTTGTCATTCTACTGCAACAGTTGTACTGGAATGATGAATACCTTGAGCAGGTAGAAATAGAAAAAAAGAATT
TTGCTAAAATGGAAAAAGGCTTTCTTTCTAAAGGAAAAAGGATGCTAATTTTGATTAATATCAGGAGATCAAATGAGTTTATGCTTCACTAATTGAATGA
TAAATGACTACAAGCGAAGGAGATAGGAGGTTTAAAAAAAAAGACCCAAAATTTCAAACATGTATCTAGAATCACAGGAAAACTACAAACAAAAATAGTG
AAAATTAGCTCGTTAGGAACCCATCCCAGATCGTTATAGACCCAACGAATTAGTAGTTCCCAACCGCGGGTGGAGTGAAATCCAACAAAAAAATCAGTAA