Detailed information on CNT30100741


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692252Oryza rufipogonOryza sativa87.0262.25100409forward
CNT30553128Oryza rufipogonOryza glaberrima87.0254.2499.27409forward
CNT30107330Oryza rufipogonOryza longistaminata48.9485.1995.65230forward
CNT30575620Oryza rufipogonOryza barthii87.0257.3699.27409forward

Expression of CNT30100741

Peptides detected in this lncRNA

>peptide 1 (65 aa)
GDKSVPPAPMTPRRRRPAAAIWRFRGGLERVDHRCALAAVDRDDGGSLFSASPGPLQLHSILDKH*

Sequence

>CNT30100741
GGGAGACAAATCGGTTCCTCCGGCTCCGATGACCCCGCGGCGGCGCCGGCCGGCGGCGGCGATATGGCGGTTTCGTGGGGGGCTTGAGCGTGTCGACCAC
CGGTGTGCCCTCGCCGCCGTGGACCGAGACGACGGCGGCTCCCTCTTCTCTGCTTCCCCAGGTCCACTTCAGCTGCACAGTATACTGGATAAGCACTGAA
CGAAGACTGTATTAACTTATTAGCAGTTTGAAACGTATTTGATGCCCGTGCCAAGCAACTAAACAAGAGGCCTTCGAATTGTCATTGACGAAGACCTGAG
CTACGGGCCTAAGGTGTGTCCATGTTTTACTCCAGTTTGGATCATGTGACCGGCATCTTGGATCTTGCCAATTGCAGTCCCAGAAATTCAGGTAGGAGCA
AATGAAATGAGGAGCATATGCAAATTGGGACTATCTTTAGGACACGTTTGCAGGCAGGATTATTTTTGCC