Detailed information on CNT30100711


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10RB4|BGAL5_ORYSJ, E-value = 3e-11

BLAST vs NONCODE: nothing found

Expression of CNT30100711

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLGSPPNCSKRTRSLLPGWRNDLGTWYLFNKVQV*

>peptide 2 (39 aa)
MTSMEVDKLRLPLEQLQEPESCCIHHGCSSHRRSAGPCV*

>peptide 3 (29 aa)
MSELLALPLALPGMCQQLHFSTQILLVRI*

>peptide 4 (30 aa)
MHIPGLCSIPHFCSQEGCLQTRQGAYTCFR*

>peptide 5 (39 aa)
PPPLPRRPRPPPPRHRTAARAEPSPFLPAREPKKVTFTG*

>peptide 6 (39 aa)
MDFLKVALRARYLCSDFKSFRCFSSHKCIRVSGACSFHH*

>peptide 7 (47 aa)
PAAPTAPAAPSPSPPYRCPRRTLAISPREGTKESHLYRLKQVFHNKQ*

>peptide 8 (45 aa)
PRRSHGARGPLPLATVPLPAPNPRHFSPRGNQRKSPLQAEASVSQ*

>peptide 9 (44 aa)
MVVVPTGEVLVPASETSVGERSSYRFGLDASLKHVHIYYLSALL*

Sequence

>CNT30100711
CCCCCGCCGCTCCCACGGCGCCCGCGGCCCCCTCCCCCTCGCCACCGTACCGCTGCCCGCGCCGAACCCTCGCCATTTCTCCCCGCGAGGGAACCAAAGA
AAGTCACCTTTACAGGCTGAAGCAAGTGTTTCACAATAAACAATAATGCTGAAAACATCACGGGCAACAGAACAGCAATCTTATGGACTTCCTTAAGGTG
GCGCTGCGTGCAAGATACCTCTGTTCAGACTTCAAGAGTTTCAGATGCTTTTCTTCACACAAGTGCATCAGAGTTTCAGGAGCATGCAGCTTCCACCACT
AGACTTTTTGTGACCCCACTGCATGGATCTCCAAAGTTATTCGATGACACTGGAACACTGCAATTGGTCATTCCAACACAGGCCTGCAGAGTTCAACGAG
TAAGAAAAACACCACTGGCATTGAAGCATGACAAGTATGGAAGTGGATAAGCTCAGATTACCTCTTGAACAACTGCAAGAGCCTGAGAGCTGCTGCATTC
ACCATGGTTGTAGTTCCCACAGGCGAAGTGCTGGTCCCTGCGTCTGAGACGTCTGTTGGGGAGAGATCCAGCTATCGATTTGGGCTGGATGCATCTCTGA
AACATGTGCACATATACTACTTGTCTGCCTTGTTGTGAAGGATATCATGCTTGGATCACCACCAAACTGCTCAAAGAGGACTAGATCATTGCTACCAGGT
TGGAGAAATGACCTGGGCACGTGGTACCTGTTTAACAAGGTACAAGTGTAACTGGTGTCTGCAATGAGATGAGCGAGCTGCTAGCACTGCCCTTAGCACT
TCCTGGCATGTGTCAACAATTACATTTCAGCACACAAATACTACTTGTGCGTATCTGAAGAACATGTCCAAGTGAGTTGACAAGCAGATTGGACTGGCTG
CCGTTTAGATATGGTTCATCACCTTTGACAACGATGCTGCAGAAAGCACGATTAATTGAAACTGATCATTGTCTAGCAAAGTGAGGGCAAGGAATGCACA
TACCTGGGCTGTGTTCAATACCACATTTTTGCAGTCAGGAAGGATGCTTACAGACCAGGCAGGGAGCTTATACGTGTTTCCGTTGAATTTGACAGTTTTA
TCAGACTGAGCATCCACGTTGGCAAGGAATGCTGCGCATATTGAATTGTCAGCAGTCTGATATACGGTTGCCTGAAGCCAGAAGAGTACAAACACCCATC
ATCATGTGTACCGG