CANTATAdb - search

Detailed information on CNT301007

BLAST search results

BLAST vs Swiss-Prot:
sp|P14641|TBA2_MAIZE, E-value = 5e-62

BLAST vs NONCODE:
NONGMAT000220, E-value = 1e-56

Expression of CNT301007

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MASLSSSIATSVCSRREWVDSTLLYGSTTEVETWGEGYTVNPSLDFLP*

>peptide 2 (64 aa)
MRSRHSETKLRLLAVVNRQTLQEEGTKARACSSANSVEDEEALETSAVVGKLPDAIKAQVNNLLA

>peptide 3 (79 aa)
LGHKPVEVGVGWALNVKGSAADVVDGLIVQQYSHISVLEEGVGGQYTVVWLNYRSRNLGGRVHSEPKLGFLAVVNRQAL*

Sequence

>CNT301007
CTGGGACACAAGCCTGTTGAGGTTGGTGTAGGTTGGGCGCTCAATGTCAAGGGATCGGCGGCAGATGTCGTAGATGGCCTCATTGTCCAGCAGTATAGCC
ACATCAGTGTGCTCGAGGAGGGAGTGGGTGGACAGTACACTGTTGTATGGCTCAACTACCGAAGTAGAAACTTGGGGGGAAGGGTACACAGTGAACCCAA
GCTTGGATTTCTTGCCGTAGTCAACAGACAGGCGCTCTAGGAGGAGGGAACCAAGGCCAGAGCCCGTTCCTCCACCAACAGCGTTGAAGACGAGGAAGCC
CTGGAGACCAGTGCAGTTGTCGGCAAGCTTCCTGATGCGATCAAGGCACAGTGAAACCAAGCTTAGACTTCTTGCCGTAGTCAACAGACAGACGCTCCAG
GAGGAGGGAACCAAGGCCAGAGCCTGTTCCTCCGCCAACAGCGTTGAAGACGAGGAAGCCCTGGAGACCAGTGCAGTTGTCGGCAAGCTTCCTGATGCGA
TCAAGGCACAGGTCAACAATCTCCTTGCC