Detailed information on CNT30100667


BLAST search results

BLAST vs Swiss-Prot:
sp|P20144|WUN1_SOLTU, E-value = 8e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692341Oryza rufipogonOryza sativa8.8638.1910097forward
CNT30589033Oryza rufipogonMusa acuminata7.4920.7686.5982forward

Expression of CNT30100667

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MQQQQTIIHIQPRFSFTVEGVHTYIIHNDLDQSY*

>peptide 2 (39 aa)
MLILSVQQNKLRVLLCNNNRPSFIFSHGLALPWKEYTLT*

>peptide 3 (41 aa)
MLLVTLLIQLSDKQAKATLLNWLASCSSGSGINHANLKQLS*

>peptide 4 (61 aa)
MCWCAGGPWNHHSRSGASSSDRPPLLPVFDTKSRKRALDHEIDWRSGEREREREREEEKRSR

>peptide 5 (64 aa)
MSFEFVLRWRGRGPAATCARGRRGGSATGTWAWTAAAAAPKRRRGWSWRKKWRRWSWRRRRRGG*

>peptide 6 (83 aa)
MARTRPGSDLCARSARRLCHRHLGLDGGGGGAEEEAWLELEEEMAAVVLAAEAERRVTVRSVLKYSLSWVITPSGPTVQACTQ*

Sequence

>CNT30100667
GTTAATTATTCAGTTCATGGCCAGATTAAAATAAGCAGAGTTCATTGCTCGGTTCATTTGGAACCCAAGAAGGAATGAAAATGGGGGGAAAGAAGAGAAA
AGAAGTACCTGTACATCACATATGTTGATTTTAAGTGTCCAACAAAACAAGCTACGAGTACTTTTATGCAACAACAACAGACCATCATTCATATTCAGCC
ACGGTTTAGCTTTACCGTGGAAGGAGTACACACTTACATAATCCATAATGACTTGGACCAAAGCTACTGATGCTACTGGTCACACTGCTGATTCAGCTTT
CAGACAAGCAAGCAAAAGCAACACTACTTAACTGGCTGGCTAGTTGCAGTAGTGGTAGTGGGATTAATCACGCAAACCTGAAGCAGCTCAGTTGAGCTGA
GCGGCTTTAGCCCATAAGCAATAAACTATAGCTAGTGACTTCACTCAGTGCGTGCGCTTCCGTTTTTATTTATTTAGCTAATCACTATTGATAAGTATCG
CTTGATTTTTTTATATGTGATTAATTTAGGGAAGCTTTTTGCGCCTTGAGTTCTTGATGTCTTTTGAGTTCGTTCTTAGATGGCGAGGACGAGGCCCGGC
AGCGACTTGTGCGCGCGGTCGGCGCGGCGGCTCTGCCACAGGCACTTGGGCTTGGACGGCGGCGGCGGCGGCGCCGAAGAGGAGGCGTGGTTGGAGTTGG
AGGAAGAAATGGCGGCGGTGGTCTTGGCGGCGGAGGCGGAGAGGCGGGTGACGGTGAGGTCGGTGTTGAAGTACTCCCTGAGCTGGGTGATTACCCCATC
GGGGCCGACGGTCCAGGCGTGCACCCAGTAGAGCTGGCGGGCGTCGACGGAGCGAGGGGAGAAGAGGAACCTTGACTCGCCGTGGTCGGCGCCGGTGAGG
AGGCGCATCATGTGCTGGTGCGCCGGCGGCCCATGGAACCACCACTCGAGGTCCGGCGCGAGCAGCTCCGATCGGCCTCCGCTCCTCCCGGTGTTTGACA
CGAAGTCGAGGAAGCGAGCTCTAGATCACGAGATCGATTGGCGCTCAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAGAAGAGATCGAGG