Detailed information on CNT30100638


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307403Oryza rufipogonTriticum aestivum25.725.8987.6773reverse complement
CNT30223464Oryza rufipogonHordeum vulgare20.0728.2292.9857forward
CNT30391302Oryza rufipogonTriticum turgidum44.0125.294.4125forward
CNT30723050Oryza rufipogonTriticum spelta25.712.9987.6773reverse complement

Expression of CNT30100638

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MLRYTGLLSRSAVAMAVDGLEAAELLGEVREADGVVEDAVGAVVVGVRPSGDADDRQVLAVRAGDGADAARA

>peptide 2 (38 aa)
EEEGDGVAAKRGVRQPWEIAADAEVHRLALPQRRRDGG*

Sequence

>CNT30100638
GCGAGGAAGAAGGGGACGGGGTCGCGGCTAAACGTGGGGTGAGGCAGCCCTGGGAGATTGCAGCTGATGCTGAGGTACACAGGCTTGCTCTCCCGCAGCG
CCGTCGCGATGGCGGTTGACGGTCTGGAAGCAGCGGAGCTCCTGGGAGAAGTCCGGGAGGCCGATGGTGTGGTGGAGGATGCGGTTGGTGCCGTAGTCGT
TGGAGTTCGGCCCTCCGGCGATGCAGATGACCGGCAGGTTCTCGCTGTACGCGCCGGCGATGGCGCCGACGCCGCGCGCGCGGG