Detailed information on CNT30100594


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10MW3|PDC2_ORYSJ, E-value = 4e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30238282Oryza rufipogonBrassica oleracea37.5725.8882.01139forward
CNT30553156Oryza rufipogonOryza glaberrima59.7334.9199.55221forward
CNT30658371Oryza rufipogonTriticum dicoccoides4023.281.76148forward
CNT30355760Oryza rufipogonLactuca sativa20.8111.5384.4277forward
CNT30369917Oryza rufipogonOryza glumipatula59.7336.5399.1221forward

Expression of CNT30100594

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MTHPNAGPFPTMTRSGCTIMALSFLRRKE*

Sequence

>CNT30100594
CACGAAGATCCTCTTGTAGTTCTCGTAAGCAGTGGTGTTCTTGTTGACGCGCTTAGCCAGCTCAGATAAGAACTCCTTCATCATGACGCACCCAAATGCC
GGGCCATTCCCGACGATGACACGCTCCGGTTGCACAATTATGGCCTTGTCCTTCTTGAGGAGGAAGGAGTAGCCGACAGAGCTGTAGTCATTGAAGATTG
GCCCTGCGAAGAGGTAGGCGTAGCCACTGGCATCAACAAGGTCGACGAAGGCCTTCCCTGCCTTTGCCACACGCAGCTTGGGGCCGCCAACGAGCACCGG
CTTCACCGCCTTGTTCAGGAACTCGACAGTGGCCTCCACCGCAGCCTCCAGACCCATCTTGTTACTCAAC