| Target | Query species | Target species | Query coverage (%) | Target coverage (%) | Identity | Alignment length (nt) | Orientation |
| CNT30595676 | Oryza rufipogon | Oryza meridionalis | 30.3 | 25 | 99 | 100 | forward |
| CNT30575392 | Oryza rufipogon | Oryza barthii | 93.03 | 100 | 98.37 | 307 | forward |
| CNT30115868 | Oryza rufipogon | Oryza nivara | 80.61 | 100 | 98.87 | 266 | forward |
| CNT30603594 | Oryza rufipogon | Oryza punctata | 79.39 | 90.66 | 91.6 | 262 | forward |
>CNT30100554
GTAATATAAAACGTAGGCAGTACAATGCGAATGTAGGGTACTCCATCCAGCTGAGGTAAACCAACTCCAATATATATACAAACACAAACAACGTACCCAA
TTTTTACTGTTAAAATACAGGCACAATGCCTGGTATCACACGTTATTAAGTAGACAGACTCGATAACCATGACACGGACAGGGACTTCTTGCCACTGGTT
TACGCACGGTTAATATTACAGACCACACATAGAGAGACGGCTTAGCTATTTGCAAATAAGCTTGACAAGATAGATGATGCTCCAAAAGGATGCGATCTCA
GCAGTTGAGTACTTACGCTGGTTCATCTAG