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Detailed information on CNT30100537


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT003128, E-value = 4e-133

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691127Oryza rufipogonOryza sativa40.2645.41100188forward

Expression of CNT30100537

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MERIALKFLVSPRGRGSDWRLWWAKPFSNILIV*

Sequence

>CNT30100537
ATACTGTTCCTCAAGAACACAGGTCCAAGTTCCACTTAGGTTGTGAGTCTCTGTGCAAGTAGAGATGTGATTTGTCAAATTTGGAACGGCACTAGTTAAT
GTCAAACTTCGATTCCCTGTTGTATTGAATTAATTCATGGAACCTACAAATCTTCCACCTGAAGATTTTTTGCCTGCCTGGAATTCTGGAAAGCATTAGC
TGCTCAGTCTCTGAAAGTTTAAGATGTGGAACAATGGAGCGGATTGCCCTTAAGTTTCTGGTTTCTCCACGTGGTCGAGGCTCTGATTGGCGACTTTGGT
GGGCAAAGCCCTTCTCTAATATCCTTATTGTTTAAGTTTCCAAAGTGTATACAACCTCTATGTACTAGGTGGCATCTAATAATTAGGGAATCTGACACAA
ACTAGGAATATCAAATAGAATACATAAATCAAGCTAGGACTAGAATTATGAACATATCTAACGCACC