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Detailed information on CNT30100517


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004164, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596243Oryza rufipogonOryza meridionalis65.6863.7892.09354forward

Expression of CNT30100517

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MTYSASHTANMQVHKDTKGWHNIGSFAKAAFSKTFKRSKTVE*

Sequence

>CNT30100517
TGTCACGCCCGAAAATTCACTAGTAATTTCCGAACTTATTTGTGCATAAAATCCTCGTCCAGGAATCAGCCGAGGTACACAAACTGACAATTTAATATAC
AGATTCATCAAATTAACTAAAACGATAAATACTTACTTAAGAGGCACTAAGTCCTCACCAAGAAGAAAACTGCAGCGGAAAATAAAATCTAGCGAAGCTC
CGGCTCCACTCCCACAGGCAGCTCAACTGGGGTATAAGCCAAACGTCTTCTCCTTCTGGATCCTTTTTCTTCAACTGAGGTTGATTGATTATTGCAAGGT
GAGCATATGACATACTCAGCAAGCCACACAGCAAATATGCAAGTGCACAAGGATACCAAAGGATGGCATAATATAGGCTCATTTGCAAAAGCAGCATTTA
GCAAAACATTTAAGAGAAGTAAAACAGTGGAGTAATTAATCAGAAATTTTAATCAACACTGAACAGCACTCCCATGCTGCACAGGCCCAACCATTCTGAA
CAACCATACCCGGCTGAACAGATCTAATCTCCAAACCAG