| Target | Query species | Target species | Query coverage (%) | Target coverage (%) | Identity | Alignment length (nt) | Orientation |
| CNT30555104 | Oryza rufipogon | Oryza glaberrima | 95.21 | 6.32 | 92.45 | 278 | reverse complement |
| CNT30597212 | Oryza rufipogon | Oryza meridionalis | 56.16 | 7.33 | 87.2 | 164 | reverse complement |
| CNT30369253 | Oryza rufipogon | Oryza glumipatula | 98.97 | 29.82 | 92.04 | 289 | forward |
| CNT30105015 | Oryza rufipogon | Oryza longistaminata | 53.42 | 10.2 | 92.31 | 156 | forward |
| CNT30604265 | Oryza rufipogon | Oryza punctata | 25.68 | 4.5 | 92 | 75 | reverse complement |
>CNT30100448
GTGTCATAGAGTGGTAGATATCCTATATAATCTAAGTCAACATCGGTATTTAACCTAATCGGCTGCCTTCTATTGACGGATGTTAGCCGATTGTAGGTTG
GATATCGATATTGCCAAGGATTATGTAGGATATATGATAACTCGACGAATTACATAAACAAGATTAGAGTGTCATAAAGATGGAAGCACTAATCCCGAAA
ACGCAAGCCGCCATAACAAGTTTTACCTCTTGTTGAAGATCGAAACCGATGTAGCTCAACCCGAAAGCAAGAACTCGTCGAAATAAAACTAA