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Detailed information on CNT30100359


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT004359, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595521Oryza rufipogonOryza meridionalis69.4891.1895.29403forward

Expression of CNT30100359

Peptides detected in this lncRNA

>peptide 1 (30 aa)
LDRTLILVFLINKMVENMDFRFGPQVVHIW*

>peptide 2 (34 aa)
MVISCVPIGGECAQTDLRTSLNVSSFRIQYNHMC*

>peptide 3 (30 aa)
MNFGKALLRVINLVLMYRVPCSCMIIISHHV

Sequence

>CNT30100359
TCTGGACAGAACTTTAATACTTGTGTTTTTGATAAATAAAATGGTGGAAAACATGGATTTTAGGTTTGGGCCTCAAGTGGTGCACATATGGTGATTAGTT
GTGTACCGATAGGGGGAGAGTGTGCCCAAACCGACCTAAGGACTTCACTCAATGTCAGTTCATTTCGTATACAGTACAACCACATGTGCTAGTATGGGAT
AGCCCAAGCTTAGTAAATTATTTATGGTTTAGCCTTACATTCTGTTAGGCCGGTGTGTATGAGTTCGGATAACTCAGAGGAACTTCCTATTTACCCCGAC
GTGGTAGTTTAGATGACTAAGTCTGTCCAATACAACGGTATTGTGCCAAGTGGGTGAGTTCCCGTTGTGTCCGCCACCACGGCGTTAAGTTTAAGGCTTA
GGCCCGCCACTTAACGGTTCTAGGTCATATAACGTGTATGGCTTAGGATGGAGTAACACGTATCGTGCTGGTGTAAGGCTAAATCATGAATTTTGGAAAA
GCTTTGTTGCGGGTAATAAATCTGGTACTTATGTATCGCGTGCCATGCTCTTGCATGATTATTATTTCGCATCATGTGGG