Detailed information on CNT30100352


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690864Oryza rufipogonOryza sativa28.0845.2499.41007forward
CNT30115849Oryza rufipogonOryza nivara16.6852.8799.67598forward
CNT30550642Oryza rufipogonOryza brachyantha4.9129.0490.34176forward

Expression of CNT30100352

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MEFIARKALIFYNFSASSPPLILKRFGQLLLSQSNVFWVGLFCIKKL*

>peptide 2 (43 aa)
MFQEYSLFFSKIQSSIKCSINFKWMKNSGKCDKLIIHIIPYFF*

>peptide 3 (85 aa)
MAASGRNPSENSPWEPACLHCTATPSMGTERTICMRAWLALSDKIPEGVFFTLKLKVWLKLKRCDEKVESLCVWKSLDVIKKLEV*

>peptide 4 (71 aa)
MNLSSRNVSMFFFFEIINVKCIQIFHIFKLVHASFGYIYIYIYIYIYIDTVLYRTSVTCWHGPTYYQPHNE*

>peptide 5 (59 aa)
MFKECSFISEVWNKICIWKGLDHNSLPNNLDLKSWWCSLSAIQPKPQQKRIMGCLITSW*

>peptide 6 (53 aa)
MPFHSFLELLLCLTHFHYWRDMHHQWKLIGRGVQEEGQESCGKKWHYKDFEFS*

>peptide 7 (62 aa)
MSDTGSQISSTKKVFFLLKTKLNFHFTFMDAMYLGKTKISSLGELGKCSKNILFFFPKYKAA*

>peptide 8 (60 aa)
MEKKTFYIQNSYNFLNTTFQLCIHKYNGVYSSKSAYFLQFQCIFPTTNFEKIWSAPAEPK*

>peptide 9 (29 aa)
MAPTGGSLKRGPHRWSRPTCSVSGSCRDR*

>peptide 10 (29 aa)
MKLLQLVWDVTYPSTYLQIRSIMMCYILH*

>peptide 11 (30 aa)
MPCLSTAFLNFSCASLTFITGEICIISGSL*

>peptide 12 (33 aa)
MHPSQQNKRAGTAHGANGGVTETWAPPLVQAHM*

>peptide 13 (34 aa)
MAWRGVAMCIGCVDRACRSRSISSSPCHAFPQLS*

>peptide 14 (39 aa)
MQCIWARQRLAALESWENVPRIFSFFFQNTKQHKMFNKF*

>peptide 15 (39 aa)
MHDKKCSKIVVLSLNTQWEQYIADLDEFIITECVYVFLF*

>peptide 16 (41 aa)
MSFLTHPMPLVAATSFRSHPSLHIYMHTAISLLYVYHSLQP*

>peptide 17 (42 aa)
MHFGINRGPSLCSSIIVAHEIDVSSVKASSLFSLTMHIMHQG*

Sequence

>CNT30100352
ATTGCATTGCATTGCATGCATGAGAAGGTTATAACCTCTGCACTCACACCATATGCATGTCCTTTTTAACCCATCCAATGCCCCTTGTTGCTGCAACCTC
ATTTAGATCTCATCCTTCTCTTCATATATACATGCATACTGCTATAAGTCTACTGTACGTCTACCACAGCTTGCAGCCATAAAGCTCTTCGTCCTCTCTC
TTTCTACGGCTGTGGAGCTGAAGCATGGCCTAGCTGAGCTAGCAGCTGGTTCTTGGTTATATAAAGAGAGATAGCTAGGATCAAGAGAGAGGCAGATGGC
ATGGAGAGGTGTTGCAATGTGCATTGGATGTGTAGATAGAGCCTGCAGATCTCGATCGATCTCTTCAAGTCCATGCCATGCCTTTCCACAGCTTTCTTGA
ACTTCTCTTGTGCCTCACTCACTTTCATTACTGGAGAGATATGCATCATCAGTGGAAGCTTATAGGGAGAGGAGTGCAAGAAGAGGGTCAAGAAAGCTGT
GGGAAGAAATGGCATTACAAGGACTTTGAATTCAGTTAGCAATGCCATGAGACAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGATGTG
ATGCTAATTTTCCATTTCATGTAAGTTAGCTTTTCATAATTAGATCAAGTTTTCTCTACTTAATTTGGTGCCCTTTTTGCTTACGTTTTTTTTTCGCTGG
GAGGTTTTGCTTACTTAATTTAAGTGCCTGCTAGTTTCTTTTTGCTAGTCCAGCTAGCCACTGCATACTTAAATTTTATATCTGCCACTGTCAGCTCCAA
TTATTTGTCGTTTGTTTTTTCAAACAACAGTCTGCATGCATTTCGGCATCAATAGAGGACCATCACTGTGTAGCTCGATCATTGTAGCTCATGAAATTGA
TGTCTCTTCCGTAAAGGCGTCTTCACTTTTTTCTCTTACCATGCATATCATGCATCAAGGCTAAAAAGGAATTCAACCTTTTCCATTTTGCTTTGCTTAG
TACTACAGTACCATGTAGGGCTTCTCGCATGCATGACAAGAAATGCAGCAAGATTGTGGTGTTGAGTTTGAATACTCAATGGGAGCAGTATATAGCCGAT
CTTGATGAATTTATCATCACGGAATGTGTCTATGTTTTTCTTTTTTGAAATAATCAATGTTAAGTGCATTCAGATTTTTCACATTTTTAAATTAGTCCAT
GCTAGTTTTGGATATATATATATATATATATATATATATATATATATTGATACGGTATTGTATCGTACGTCTGTAACATGTTGGCATGGCCCCACGTATT
ATCAGCCTCACAATGAGTGATAGTATATCATATAATAGAAATCAATAATACTACAATGAGTGATACAGGCTCACAAATAAGTAGTACTAAGAAAGTTTTT
TTTTTGTTAAAAACAAAATTGAATTTTCATTTCACGTTTATGGATGCAATGTATTTGGGCAAGACAAAGATTAGCAGCCTTGGAGAGTTGGGAAAATGTT
CCAAGAATATTCTCTTTTTTTTTCCAAAATACAAAGCAGCATAAAATGTTCAATAAATTTTAAGTGGATGAAAAATAGTGGCAAATGTGATAAACTGATA
ATACATATAATTCCATACTTTTTTTAAGAAATTCCATACTTTTCATACATACTAGTCCGTCCTTTCCCTCTTATAGATTACTAGTACTACCTAGTACTAC
TCTCTCTCTCTCTCTCTTCGTCCCAAAATAAATGAAACTACTCCAGCTAGTATGGGACGTGACATATCCCAGTACTTATCTTCAGATTCGTAGTATTATG
ATGTGTTATATCTTGCATTAGATTTGTTTATTTTGGAATGTGAGAAATAGGTTATCACGGGCACGCTTCCTAAACTCCTAAACTGTGTGATTTATGGAAA
AAAAAACATTCTATATACAAAATTCTTATAATTTCTTAAACACAACCTTTCAACTTTGTATCCACAAATATAATGGAGTTTATAGCTCGAAAAGCGCTTA
TTTTCTACAATTTCAGTGCATCTTCCCCACCACTAATTTTGAAAAGATTTGGTCAGCTCCTGCTGAGCCAAAGTAACGTTTTCTGGGTTGGCTTGTTCTG
CATAAAAAAACTCTAACTGCGCAAAACCTTCTTCAGTGACACTGGACGTGCGATTGGATCTATCCTCTTTGTAGGGAGGCATTTGAAGGCACTTCTCACA
TGTTCAAGGAATGTTCTTTCATCTCTGAAGTGTGGAACAAAATCTGTATTTGGAAGGGGTTAGATCACAACTCTTTGCCTAACAACTTGGATTTGAAAAG
CTGGTGGTGCTCTCTTTCAGCCATTCAACCAAAACCCCAGCAAAAAAGAATTATGGGTTGTTTGATCACTTCCTGGTAGAACATCTGGTTGGAGCGGAAT
AAGCGTATATTCCAAAAAACTTTGTCATCGGCTGATAGGGTGGCTTCCTTGATTCTGCAAGATCTTGACCTGAGACATTCAGCTTTCCAATCTCAGTGAG
GCCGTCCCTCTTTTTGTAATTTTTGGTTTTTTTCGCTTTGCTTTTGTGCTCTGTTTTTGTAAACAACTTTTTCTTCTTCTAATATATTCCTGCAGCCCTT
CTGCGTCGTTTCCCTAAAAAATAAATATAATGGCATATTCAGAAAAAAAAAAAGACTATACTGTAGCAAAATTAAGGGGGAAGTTTAATGGGCCCACTCT
CTGAAAGGCTGAGGCAGGGGATTGGGTAGTTCCATATCCTGTCAAGCTGGAGAAGTATAGGCTTTTGCTTTAGAGAGTCCCACAGGCAGTGAGGCAGTGA
CAGAAGGCAGCTTTCCCTCCTGCTCACTCCACCTCTCTTTCCTCACCTCAGCTCAGCTCAGCCCAGCCCGCTTCAGAGAAGGAAGCTCACTCACCATGCA
TCCATCGCAACAAAACAAAAGAGCAGGGACGGCACATGGCGCCAACGGGGGGGTCACTGAAACGTGGGCCCCACCGCTGGTCCAGGCCCACATGTAGTGT
CAGTGGCTCGTGCCGTGACAGGTAGGCTGCTCTGCTCATCTCCGGAATCTAGATCGATCTCACTCGCCCTGTCTGTCGTCGTCTCGCTCATGTCACTCGT
AGGGAGATCCGAGTAGAAGGAGAAGAAAGAATTTGGATGAATTCCACTGCAAGGAAGGCAAAGGCAAAGGGAGCAAAAGCACAAGGATGATGATGTTGGA
TGGCTGCTTCAGGAAGGAATCCCAGTGAAAATTCTCCCTGGGAACCTGCCTGCCTGCACTGCACTGCAACCCCCAGCATGGGGACAGAAAGAACAATATG
CATGCGTGCGTGGCTGGCTCTCTCAGACAAAATACCTGAGGGTGTGTTTTTCACGCTAAAATTAAAAGTTTGGTTGAAATTAAAACGATGTGACGAAAAA
GTTGAAAGTTTATGTGTGTGGAAAAGTTTGGATGTCATAAAAAAGTTAGAAGTTTAAAGAAAACTTTGGATCTAAACTCAGCCTGATGTGATTAAGCTAA
AGTAGGAATAAATGAACAGTAACTCCAACACACCACTTCATTTCACTTTTGGCCGGTCACTGAGACCCTTCTACTGAAGTATGAAC