Detailed information on CNT30100351


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005030, E-value = 4e-99

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691621Oryza rufipogonOryza sativa83.6952.84100354forward

Expression of CNT30100351

Peptides detected in this lncRNA

>peptide 1 (59 aa)
KDSACNVLAHSNVYLGFLWPDLVVLGSSSCLLCCRASPTPSLLPGPLRPLSAARRGFRL*

>peptide 2 (91 aa)
KRLCMQCSSSFKRLFGVFMARSSRSRVVIVFVVLPGISNAIAASWTSPTPFSCTERIPVMSYTSCVVIALPRATRAMSDLLQLGSYPVGLP*

Sequence

>CNT30100351
AAAAGACTCTGCATGCAATGTTCTAGCTCATTCAAACGTTTATTTGGGGTTTTTATGGCCAGATCTAGTCGTTCTCGGGTCGTCATCGTGTTTGTTGTGT
TGCCGGGCATCTCCAACGCCATCGCTGCTTCCTGGACCTCTCCGACCCCTTTCAGCTGCACGGAGAGGATTCCGGTTATGAGTTATACTTCTTGTGTGGT
CATTGCTCTGCCGAGGGCGACGAGGGCAATGAGTGACCTCTTGCAGCTTGGCTCTTACCCGGTTGGTTTGCCCTAGTGGGATTGTGGCACCACCGGTTTT
ATCTTTTGCTTATGAACTCTATTTGAGACTTCCGCTGCTATATTTATGTGTTGTATGTTGGGACCTTGGACCCTATTATGTGTCATGTACCTCACTGCAC
TTTAACCCTATTATGGTACTTGC